Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0230 ATGTATAACAGCAGCATGACACCAGATTTCTTAGATCCATGTACTGAAGAGTTGATGAAAGCACTTGAACCTTTCATGAGAAGTGATTCGTCCACGTCCTTCTCTCTTTCTTCTCCATCCTCCCATTCTCCTCCTTTTATTTCTCCTTCTCTGCCCGATTTCTGGAGCCATGAGCTAAACAGTATTGGACACACCAGTTCCATAGGGCTCAACCAACTCACCCAATCTCAAATTCTTCAAATTCAAGCCCAATTCAACGTTCAACAAAAACAGAAGCATCAGCATATGGCTTCCGTGGCTGCAACTTCACTCCAACGCCGCCGTTCAACCCAGAATCTGCTTGTCCCAAAACCCGTGCCTATGAAACAACATGGTACGCCTCCAAAACCCACAAAACTCTACCGCGGAGTGAGACAACGACATTGGGGTAAATGGGTCGCGGAGATCCGACTACCCAAGAACCGTACCCGACTCTGGCTTGGCACCTTTGATACCGCAGAAGAAGCAGCCTTGGCATACGACAACGCAGCGTATAAGCTAAGAGGAGAGTTTGCTAGGCTCAATTTTCCTCATTTACGCCACCATGGGGCTCATGTGTTTGGTGAATTTGGCGATTACAAGCCTCTTCACTCATCCGTGGATGCCAAGCTCCATGCTATTTGTGAAAACTTAGCAGCCAATTCCCAGAAACAGGGGAATACAGAGAAGCCCTGCACCGTCGTCGACACAAAGCCGAAGATACAAGGTGTTACACAGGATTATAATACTCTGGACAACTTAGCTTCGTCCCCCTTGTCCGATGAATCTGCCGGTTCGTCTTCTCCTAAATCAGATATCACTTATTTGGGTTTCCTGGATTCTATGTGGGACGAAACAACGAACCTTGGCTTGGAGAAGTATCCTTCCCTGGAGATTGATTGGTCTGCTATCTGA 933 0.4727 MYNSSMTPDFLDPCTEELMKALEPFMRSDSSTSFSLSSPSSHSPPFISPSLPDFWSHELNSIGHTSSIGLNQLTQSQILQIQAQFNVQQKQKHQHMASVAATSLQRRRSTQNLLVPKPVPMKQHGTPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYKLRGEFARLNFPHLRHHGAHVFGEFGDYKPLHSSVDAKLHAICENLAANSQKQGNTEKPCTVVDTKPKIQGVTQDYNTLDNLASSPLSDESAGSSSPKSDITYLGFLDSMWDETTNLGLEKYPSLEIDWSAI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0230 310 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 12 310 - -
Dere03g0230 310 FunFam Ethylene-responsive transcription factor 2 132 191 - -
Dere03g0230 310 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
Dere03g0230 310 Pfam AP2 domain 134 183 IPR001471 GO:0003700|GO:0006355
Dere03g0230 310 SMART rav1_2 133 196 IPR001471 GO:0003700|GO:0006355
Dere03g0230 310 Gene3D AP2/ERF domain 133 191 IPR036955 GO:0003700|GO:0006355
Dere03g0230 310 SUPERFAMILY DNA-binding domain 133 191 IPR016177 GO:0003677
Dere03g0230 310 CDD AP2 132 192 IPR001471 GO:0003700|GO:0006355
Dere03g0230 310 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Dere03g0230 310 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0230 Dere-ChrDere03 5991886 5992818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0230 1 310 AP2-EREBP Transcription Factor Family AT4G39780 49.201 8.83e-82 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere03g0230 AP2 4.5e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0230 03 5991886 5992818 Dere03g0230 03 5991886 5992818 ECH