Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0218 ATGGGAAGGAAGCAATCTCTGCGGAGCAAAGCAGCTCACTTCGTATCAGATCTCACCACTGTTCTACTCAACCCCATCTCTGACAAACCCTCTAAACCCCCTCCTCCTCCTTCTGAAGAAGTGGACATATCAAATGTGACTGATTTGGAGTCAACTAATCGCGATGGTAGGCAGAATTTAATTGATGGGCCTGATACTTCATCCTTCACTGCATTCCTCTATTCGTTCTTGTCTTCCTCAGATTCCGGGGATAATGCAAACTCAGATGCGCAAAATGACAATAAAAGTGGAACTGATATGCCTCCACCAGACTCAGTCATGAAGGAAAATAGTGGAAAGAAAAGTGTGTTTTCTAGGGGTAAGCAATCACTTGGCAGAGCTATCAACCAAGCTGTGAGAATCAGCGGATTTCGCTATCATGAACGCAAGGATGATGTCGAAATGAAATTGGATGATGGACGTGGTTCCAAATTATCTGGAGTTGAGATGAGACATATTCAACCTGTGGAAGAGCCCATGTCTTTGGTTGATCTACCTGAAATTTCTGAACCTTCAGTGCTTCTTTCAGAGAAAATAAGAAATGTTCTCTATGCTTCACTTCCAGCTCTTATTCATGGGAGGAAATGGATGCTGCTATATAGTACATGGAGGCATGGTATATCACTTTCAACTCTATACAGGAGAAGCATGCTTTGGCCTGGCTTGAGTTTGCTGGTTGTCGGAGATCGTAAAGGAGCAGTTTTTGGTGGCTTGGTTGAAGCACCACTAAGACCATCCAACAAGAGAAAATATCAGGGAACAAATAACACGTTTGTGTTTACAAACACCTCTGGTCATCCTACTGTGTATCGTCCAACAGGGGTAAACCGCTATTTCACACTCTGCAGCACCGACTTCCTGGCAATTGGTGGGGGAGGTCATTTTGCGCTTTATTTGGATGGTGATCTATTGAACGGGTCTAGTTCAGTCTCAGAAACTTATGGAAATCCTTGCCTTGCACATTCTCAGGACTTTGAAGTGAAGGAAGTTGAGTTGTGGGGCTTTGTATATGCTTCAAAGTATGAAGAAGTTTTAGCATTGAGCAGGACAGAGGCCCCTGGGATCTGTCGATGGTAG 1116 0.44 MGRKQSLRSKAAHFVSDLTTVLLNPISDKPSKPPPPPSEEVDISNVTDLESTNRDGRQNLIDGPDTSSFTAFLYSFLSSSDSGDNANSDAQNDNKSGTDMPPPDSVMKENSGKKSVFSRGKQSLGRAINQAVRISGFRYHERKDDVEMKLDDGRGSKLSGVEMRHIQPVEEPMSLVDLPEISEPSVLLSEKIRNVLYASLPALIHGRKWMLLYSTWRHGISLSTLYRRSMLWPGLSLLVVGDRKGAVFGGLVEAPLRPSNKRKYQGTNNTFVFTNTSGHPTVYRPTGVNRYFTLCSTDFLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLAHSQDFEVKEVELWGFVYASKYEEVLALSRTEAPGICRW 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0218 371 MobiDBLite consensus disorder prediction 22 45 - -
Dere03g0218 371 Pfam TLD 211 348 IPR006571 -
Dere03g0218 371 SMART 109ultra 185 349 IPR006571 -
Dere03g0218 371 ProSiteProfiles TLDc domain profile. 186 349 IPR006571 -
Dere03g0218 371 MobiDBLite consensus disorder prediction 80 122 - -
Dere03g0218 371 MobiDBLite consensus disorder prediction 80 99 - -
Dere03g0218 371 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 16 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0218 Dere-ChrDere03 5786759 5790078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0218 208 357 EF-hand Containing Proteins AT5G06260 30.000 1.55e-14 72.0