Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0217 ATGTTTGGGCAGAAACATGAGCTTATTTTTGGAAGAATAAGCCGTCATTTTACCATCCTCTGTTCCTCCCTCTCCCTCCCTGGTTACACCAGAGAAGCCGCCATGTGTGGAATACTTGCAGTCTTGGGTTGCATCGACAACTCTCAGGCCAAGCGTACACGTATCATCGAGTTGTCGAGGAGGTTGCGGCATAGAGGTCCTGATTGGAGTGGCTTGCATTGCCACGAAAACTTTTATCTTGCCCATCAACGGCTGGCAATTGTCGACCCTACCTCAGGGGATCAACCTCTATATAACGAAGACAAGACTGTTGTTGTTACCGTAAACGGGGAGATATACAACCATAATCAATTGAGACAGAAATTGACTTCTCATCAATTTCGAACAGGAAGTGATTGTGAAGTGATTGCCCACCTTTATGAAGAATATGGAGAAGACTTTGTCGATATGTTGGATGGCATGTTCTCCTTTGTCCTTCTTGACACTAGAGATAACAGCTTCATTGCAGCTCGTGATGCTATTGGCATTACCCCTCTTTACATGGGCTGGGGTCTTGATGGATCTATATGGTTTGCATCTGAAATGAAAGCTTTGAGTGATGATTGTGAGAGATTCATATCATTTCCTCCTGGACATCTATATTCTGGCAAACAGGGAGAACTCAGAAGGTGGTATAAACCGCCTTGGTACTTGGAGAACATTCCATCAACCCCATATGATCCTATAGTTTTACGCAAGGCATTTGAGACTGCTGTAGTTAAGAGACTTATGACTGATGTACCATTTGGAGTTCTTTTGTCTGGAGGACTGGACTCGTCACTGGTTGCTGCCGTTGCCTCTCGTCATTTGGCTGAATCTGAAGCTGCTCGTCAGTGGGGATCACAATTACATACCTTCTCTGTTGGTTTGAAGGGCTCACCAGATTTGAAAGCTGCCAGAGAGGTAGCAGATTATCTTGGTACTCGTCACCATGAATTTCATTTCACTATTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTACCATATTGAAACATATGATGTAACAACCGTCAGAGCAAGCACTCCTATGTTTCTTATGTCTCGAAAAATTAAATCCTTGGGAGTGAAAATGGTTCTTTCGGGAGAAGGTTCAGATGAAATATTTGGAGGTTACTTGTATTTCCACAAGGCACCTAACAAGGAAGAGTTTCACCAAGAAACATGTCGAAAAATTAAAGCTTTACATCTTTATGACTGCCTGAGAGCTAATAAATCAACCTCAGCGTGGGGTCTAGAGGCACGTGTACCATTCTTGGATAAAGAATTCATCAACATAGCCATGAGCATGGATCCAGAGTGGAAAATGATAAGACCTGATCTTGGAAGGATAGAGAAGTGGGTTGTACGTAATGCATTTGATGATGATCAGAATCCATATTTACCAAAGCACATATTGTATAGGCAGAAGGAACAGTTCAGCGATGGTGTCGGATACAGCTGGATTGATGGCTTGAAGGAGCATGCCAACAAACAAGTCACAGACGCAATGTTGATGAATGCAAGCTTTATTTACCCAGAAAACACTCCTACCACGAAAGAAGCATATTTCTACCGAACAATTTTTGAGAAGTTCTTTCCTAAGAATGCAGCTAGGTCAACAGTTCCAGGAGGTCCCAGTGTAGCATGCAGTACTGCAAAAGCTGTGGAATGGGATGCAGCATGGTCAAAAAATCCTGACCCTTCTGGTCGTGCTGCACTTGGTGTTCATGAAGCGGCATACGAGGAAGCAATGGAAGCAAAAGGTGCCAAACCTATCAATGGAGCCCATTAA 1815 0.4331 MFGQKHELIFGRISRHFTILCSSLSLPGYTREAAMCGILAVLGCIDNSQAKRTRIIELSRRLRHRGPDWSGLHCHENFYLAHQRLAIVDPTSGDQPLYNEDKTVVVTVNGEIYNHNQLRQKLTSHQFRTGSDCEVIAHLYEEYGEDFVDMLDGMFSFVLLDTRDNSFIAARDAIGITPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHLYSGKQGELRRWYKPPWYLENIPSTPYDPIVLRKAFETAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRHLAESEAARQWGSQLHTFSVGLKGSPDLKAAREVADYLGTRHHEFHFTIQEGIDALEEVIYHIETYDVTTVRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGLEARVPFLDKEFINIAMSMDPEWKMIRPDLGRIEKWVVRNAFDDDQNPYLPKHILYRQKEQFSDGVGYSWIDGLKEHANKQVTDAMLMNASFIYPENTPTTKEAYFYRTIFEKFFPKNAARSTVPGGPSVACSTAKAVEWDAAWSKNPDPSGRAALGVHEAAYEEAMEAKGAKPINGAH 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0217 604 FunFam Asparagine synthetase [glutamine-hydrolyzing] 36 226 - -
Dere03g0217 604 CDD Asn_Synthase_B_C 245 490 IPR001962 GO:0004066|GO:0006529
Dere03g0217 604 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 36 226 IPR029055 -
Dere03g0217 604 Pfam Asparagine synthase 244 395 IPR001962 GO:0004066|GO:0006529
Dere03g0217 604 FunFam Asparagine synthetase [glutamine-hydrolyzing] 229 548 - -
Dere03g0217 604 CDD AsnB 36 226 IPR033738 -
Dere03g0217 604 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 244 518 - -
Dere03g0217 604 PIRSF Asn_synthetase_glu-h 35 395 IPR006426 GO:0004066|GO:0006529
Dere03g0217 604 PIRSF Asn_synthetase_glu-h 391 550 IPR006426 GO:0004066|GO:0006529
Dere03g0217 604 Gene3D HUPs 229 548 IPR014729 -
Dere03g0217 604 NCBIfam asparagine synthase (glutamine-hydrolyzing) 36 400 IPR006426 GO:0004066|GO:0006529
Dere03g0217 604 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 36 219 IPR017932 -
Dere03g0217 604 Pfam Glutamine amidotransferase domain 82 199 IPR017932 -
Dere03g0217 604 PANTHER ASPARAGINE SYNTHETASE 35 589 - -
Dere03g0217 604 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 34 228 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0217 Dere-ChrDere03 5779523 5786187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0217 95 198 PRT Gene Family AT4G38880 33.621 1.63e-07 52.4