Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0173 ATGGGAAGACCAAGGTGCTTCTTGGACATTAGCATAGGGGTTAAGCTGGAAGGGAGGATTGTGGTTGAGCTCTTCAACGATGTCACTCCCAAGACTATTGAGAATTTCAAGGCTCTCTGCACTAGTGAGAAGGGCATTGGTTCCACTACTGGGGTGCCCCTCCATTTCAAGGGTTCTTGTTTTCATCGTGTTATTAAAGGCTTTATGATCCAAGGAGGAGACATATCTGCTGGAGATGGTACTGAAGGAGAGTCTATATATGGAATGAAGTTTGAATATGAGGAGTTTGAGTTGAAGCATGAAAGGAAAGGGATGCTATCTATGGCCAATGCTGGTCCTGACACAAACGGGTCTTTGTTTTTATCACTACGACCCGAACTTTGCATCTTGATGGCAAGCATGTTGTATTTGGGATGGTGA 420 0.4452 MGRPRCFLDISIGVKLEGRIVVELFNDVTPKTIENFKALCTSEKGIGSTTGVPLHFKGSCFHRVIKGFMIQGGDISAGDGTEGESIYGMKFEYEEFELKHERKGMLSMANAGPDTNGSLFLSLRPELCILMASMLYLGW 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0173 139 PIRSF Peptidylpro_ismrse 1 127 IPR024936 GO:0003755
Dere03g0173 139 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Dere03g0173 139 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 IPR002130 GO:0000413|GO:0003755
Dere03g0173 139 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 IPR002130 GO:0000413|GO:0003755
Dere03g0173 139 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 121 - -
Dere03g0173 139 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 10 120 IPR002130 GO:0000413|GO:0003755
Dere03g0173 139 SUPERFAMILY Cyclophilin-like 3 120 IPR029000 -
Dere03g0173 139 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 IPR020892 GO:0003755|GO:0006457
Dere03g0173 139 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 139 IPR002130 GO:0000413|GO:0003755
Dere03g0173 139 Gene3D - 1 129 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0173 Dere-ChrDere03 5167130 5167549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0173 18 123 U-box Gene Family AT5G67530 44.860 1.58e-20 84.7