Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0126 ATGGGTGCATGTTCTATCCTTCTGATTATACTTATATCTTATATTTTCATATCATCTGCGGTTTGCCAAGTTCAAGAGTTCATCAGCATAGACTGTGGAGGCACTAGTAATTACACTGACAGTAGCACAGGACTGGCGTGGATTTCAGACTATGGGATCATGAAACATGGCACACCAGGGGAAGTAGAAAGCCCCATTAGAAACAGGGAACAGTATCAGAGACGCAGAGACTTTCCCATAGACAACAAGAAATACTGTTACACACTAAACACCGAGGAGAGAAGAAGATACCTGGTGCGAGCGACGTTTCAGTATGGAAGCTTGAAAAGTGGAGACACATACCCCCAGTTTCAGCTCTACTTGGATGCAACGAAATGGGCTACCGTGTCAATATATGATGCCTCAAGAATCTATGTGAAGGAAATGATCATAAGGGCACCCTCAAATTCTATTGATGTGTGCATGTGCTGTGCTACCACTGGTTCTCCTTTCATATCAACTCTAGAGCTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAAGACAGTTTCTTCTTAAAAGTTGCTGCAAGAATCAACTTCGGTGCTGCGAGTGAGGATGCTATCAGGTATCCTGATGACCCGTATGACAGAATTTGGGAATCAGATCTTATTAAAAGGCAAAACTATCTTGTTGGGGTGGCCCCAGGCACAGAAAGGATTAATACAACAAAGAACATTGCGATAGGAACAAGAGAAAACCCACCTGTCAAAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGGGTACTCAGCTACAGATTAAACCTGGAAGACTTCCCTGCCAATGCTCGAGCTTATGCTTATTTCGCTGAGATTGAAGACCTGGGTAAGAATGAGACTCGAAAATTCAAATTGCAGCAACCTTATATACCTGACTATAGCAATGCAGTGGTTAACATAGCTGAGAATGCCAATGGAAGCTACACTCTTTATGAACCTAGTTACATGAATGTGACTCTGGATTTTGTTCTGTCATTCTCCTTTGTTAAGACCCGGGATTCTACTCGAGGGCCACTTCTAAATGCAATGGAAATAAGCAAATACCAACAGGTTGCTTCAAAGACTGACAGGCAAGATTTGACTGTTGTAAATGCATTTCGCTCCATGTCTGCTGAAAATGCCCAGATGAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAGTGGGTAAATTGTAGTGCCACCACACTGCCAAGAATTACAAAAATAAACCTGTCAAGAAAGAATGTGAAGGGGGCAATCCCATCTGACCTTAACAACATGGAAGCATTGACAGAGTTGTGGTTGGATGGAAACTTAATTACAGGTCCACTACCTGACTTGAGCAATCTCATCAATCTAAAAATTGTGCATCTAGAGAACAACCAATTGACTGGTCCACTACCATCTTACCTGGGTAGTTTGCCAAGCTTAGAAGCACTGTTCATACAAAATAACTCGTTTACTGGGGAAATTCCATCAGGATTAGTATCTGGAAAAATCATTTTCAACTACGATGGTAATCCCGGACTACATAGAGGGAACAAGAAACACTTCAAGTTGATACTGGGAATTTCGATTGGAGTTCCTGTGGTTTTAGCAATGTTATTTTTAGGAAGTTTGGTGCTAATGCATAATCTTCGAACAAAGGCATCTCTAAAGAAAAGTGATGAATATGGTATTTCTAAAGGCAGTAGAAGTAAACCTGTAGGTCCATACTCATTTGTTCGAGGAGGGAGTCTGATGGATGATGGTATTGCGTGCTATATTGGGCTCTCAGAGTTGAAAGAAGCAACTAAGAATTTTGAAAAGAAAATCGGCAAAGGAAGCTTTGGATGTGTCTACTATGGAAAAATGAGAGATGGAAAAGAAGTGGCAGTTAAGATTATGACTGATTCATCCAGCCATGGAAACCATCAGTTTGTGACTGAGGTGGCCCTTCTGTCAAGAATTCATCACAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATATCAGAATATTCTGGTTTACGAGTTTATGCACAATGGCACCTTACGGGATCACATTCATGGTTCTGATAAGCAGAAACACTTGGACTGGTTAGCTCGTCTTCGTATAGCAGAAGATGCAGCTAAAGGTCTTGAATACTTGCACACAGGATGCAATCCTAGTATCATACACCGGGATGTAAAGACAAGCAATATTCTCCTGGACATCAATATGAGAGCAAAGGTGTCAGATTTTGGACTGTCGAGACTGGCTGAAGAAGATTTAACCCATATATCAAGTATTGCACGAGGAACCGTAGGTTACCTGGATCCTGAGTATTATGCAACTCAGCAATTAACAGAGAAGAGTGACGTGTACAGCTTTGGAGTTGTTCTGCTGGAACTGATATCGGGAAGAAAGCCTGTGTCATCAGAAGATTATGGTTCTGAAATGAATATTGTTCACTGGGCAAGATCTCTAATTCGCAAAGGCGATGTGATGAGCATCATGGATCCTTCTCTAGTAGGAAATGTGAAAACTGAATCGATTTGGAGGGTTGCTGAAATTGCTATGCAATGTGTAGAACAACATGGGGCTCGCAGGCCCAGAATGCAAGAGATCATATTGGCTATACAAGAAGCAGTCAACATTGAAAAAGGAACAAACAGCAAGCTCAAACTATCATCTTCAGGTAGTTCCAAAGCTCAATCTTCTCGAAAAACCTTACTTACAAGTTTTCTCGAAATCGAGAGCCCTGACCTGTCCAATGGTTGCCTCCCTTCCGCAAGGTAA 2796 0.4167 MGACSILLIILISYIFISSAVCQVQEFISIDCGGTSNYTDSSTGLAWISDYGIMKHGTPGEVESPIRNREQYQRRRDFPIDNKKYCYTLNTEERRRYLVRATFQYGSLKSGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDSFFLKVAARINFGAASEDAIRYPDDPYDRIWESDLIKRQNYLVGVAPGTERINTTKNIAIGTRENPPVKVMQTAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGKNETRKFKLQQPYIPDYSNAVVNIAENANGSYTLYEPSYMNVTLDFVLSFSFVKTRDSTRGPLLNAMEISKYQQVASKTDRQDLTVVNAFRSMSAENAQMNEGDPCVPTPWEWVNCSATTLPRITKINLSRKNVKGAIPSDLNNMEALTELWLDGNLITGPLPDLSNLINLKIVHLENNQLTGPLPSYLGSLPSLEALFIQNNSFTGEIPSGLVSGKIIFNYDGNPGLHRGNKKHFKLILGISIGVPVVLAMLFLGSLVLMHNLRTKASLKKSDEYGISKGSRSKPVGPYSFVRGGSLMDDGIACYIGLSELKEATKNFEKKIGKGSFGCVYYGKMRDGKEVAVKIMTDSSSHGNHQFVTEVALLSRIHHRNLVPLIGYCEEEYQNILVYEFMHNGTLRDHIHGSDKQKHLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYATQQLTEKSDVYSFGVVLLELISGRKPVSSEDYGSEMNIVHWARSLIRKGDVMSIMDPSLVGNVKTESIWRVAEIAMQCVEQHGARRPRMQEIILAIQEAVNIEKGTNSKLKLSSSGSSKAQSSRKTLLTSFLEIESPDLSNGCLPSAR 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0126 931 ProSitePatterns Protein kinases ATP-binding region signature. 615 637 IPR017441 GO:0005524
Dere03g0126 931 Gene3D Phosphorylase Kinase; domain 1 596 684 - -
Dere03g0126 931 Gene3D Transferase(Phosphotransferase) domain 1 685 903 - -
Dere03g0126 931 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 685 892 - -
Dere03g0126 931 SUPERFAMILY L domain-like 399 506 - -
Dere03g0126 931 ProSiteProfiles Leucine-rich repeat profile. 439 461 IPR001611 GO:0005515
Dere03g0126 931 Pfam Protein tyrosine and serine/threonine kinase 611 876 IPR001245 GO:0004672|GO:0006468
Dere03g0126 931 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 408 501 - -
Dere03g0126 931 SUPERFAMILY Protein kinase-like (PK-like) 599 876 IPR011009 -
Dere03g0126 931 Gene3D Ribonuclease Inhibitor 372 513 IPR032675 -
Dere03g0126 931 ProSiteProfiles Protein kinase domain profile. 609 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0126 931 Pfam Malectin-like domain 30 363 IPR024788 -
Dere03g0126 931 CDD STKc_IRAK 615 876 - -
Dere03g0126 931 PANTHER OS07G0107800 PROTEIN-RELATED 457 883 - -
Dere03g0126 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Dere03g0126 931 SMART serkin_6 609 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0126 931 FunFam serine/threonine-protein kinase PBS1-like 590 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0126 Dere-ChrDere03 4744470 4749858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0126 1 931 Receptor kinase-like Gene Family AT1G67720 69.165 0.0 1296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere03g0126 Malectin_like 5.4e-90 CL0202