Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0123 ATGGTGACTATGAAGCTCAAAGTGAAAAAAATCTCCAAAGAAATCATCAAACCTTCGTCTCCAACCCCACACCATCTTCGCCGTTACCAACTTTCGTTTCTCGATCAAGTCTCTCCCTTGGTCTACAATCCTCTCGTCCTCTTTTACGCTGCTTCCGATGACATCGCCACCATTTCCGACCACCTCAAAAAGTCATTGTCACATGTCCTTACCCATTACTATCCTCTCGCTGGGCGACTTGTCGGCAACAACTTCATACACTGCAACGATGAGGGCGTCCCCTACTCAGAAACCAGAGTGAAGTGCCAACTCTTGGATTTTATTCAGAACCCAGTCTCCTCTGAACTGAACCACTTGGTTCCATTTCAACTAGACAAGGTCACCGACATAACCTTCGGCGTCCAGTTTAATGTCTTTGAATGTGGTGGCATCGCAATTGGTGCTTGTCTTTCTCATCAGATCGCAGACGGTTTGTCTTTGTTAACGTTCCTCAGTTGTTGGGCGTCCATTGCTGGTGGTAGTGGGCAACCTGTGTTGACAAATGATCCAAGTGCAAGGTTCGTGTCGGCTAACCTATTCCCTCCAAAAAACACGTCAGGGTTCGATCCTAGGTCTGGAATCGTAAACGACAATATTATGACCAAGAGGTTTGTGTTTAATGCTTCAGTTATCGAAGCTCTCAAAACAAAATATGCTCAGCCTAATGAGAAGCTCCCTTCGAGAATAGAGGCCTTGTCAGCTTTCATATGGAGTCGTTACGTGGCGGCGACGCAAGAACAATCAGGCACACGAGAAACCTACTCGGTGGTTCACGCTGTTAACCTCCGTCCAAGGATGGAACCCCCTTTGCTTCCGCATTCCTTTGGAAATTATTACCGTTTTAGTACGACGTTAATTCCAACGTTAGAAAATGAAGAAGAGTGCAATTATGGGACTGTGTTTGTAAAACAGGTGAGAGAGCAAATAAAGAAGATTGACAAGGACTATGTGAGGAAACTCCAAGAGGGAGCTAGCGAACATTTGGATTTCCTTAAGGACAATTCATATAGACTACTCGTGAAGGGAGATATGGTTTCATTTAATTTCACTAGTTTGTGTAGGTTTCCTTTGTACGATGCTGATTTTGGTTGGGGGAAACCTACGTGGGTAGGTTCAAATGCCTTGACTTTTAAGAATCTGGTTGTGTTTTTTGACACCAAAACGGGTGGTGGCATTGAGGCTTACATTAGCTTGAAGGTGGAAGACATGGCCAAGTTTGAAGCTGATAAGGAGTTGCTTGCACGTGTTACTAGATCAGCGACTTGTTGA 1308 0.448 MVTMKLKVKKISKEIIKPSSPTPHHLRRYQLSFLDQVSPLVYNPLVLFYAASDDIATISDHLKKSLSHVLTHYYPLAGRLVGNNFIHCNDEGVPYSETRVKCQLLDFIQNPVSSELNHLVPFQLDKVTDITFGVQFNVFECGGIAIGACLSHQIADGLSLLTFLSCWASIAGGSGQPVLTNDPSARFVSANLFPPKNTSGFDPRSGIVNDNIMTKRFVFNASVIEALKTKYAQPNEKLPSRIEALSAFIWSRYVAATQEQSGTRETYSVVHAVNLRPRMEPPLLPHSFGNYYRFSTTLIPTLENEEECNYGTVFVKQVREQIKKIDKDYVRKLQEGASEHLDFLKDNSYRLLVKGDMVSFNFTSLCRFPLYDADFGWGKPTWVGSNALTFKNLVVFFDTKTGGGIEAYISLKVEDMAKFEADKELLARVTRSATC 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0123 435 Gene3D - 4 200 IPR023213 -
Dere03g0123 435 Coils Coil 315 335 - -
Dere03g0123 435 PANTHER F21J9.9 10 426 - -
Dere03g0123 435 Pfam Transferase family 6 425 - -
Dere03g0123 435 Gene3D - 209 429 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0123 Dere-ChrDere03 4715600 4717437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0123 4 420 Monolignol Biosynthesis Gene Families AT5G48930 27.027 5.62e-31 121