Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0112 ATGGCTGTTGTTTTGGATACTCCATTGGGAGTACTCAATGCTGCATTCTTCATTGCGATACTGATATGGGTTCTTCTGGACAGTTTGAGAGAAAGCAAACGTAACGGTGTTGAATACTTGAAACATGTACCGAAACGATTTGCTGTTCTCTCCTCTATCACACTTGCTTGTGATACTATTCTTTCAGTTTTGAACTTTGCTTTTGCCTTTCATGAATTTAAGAGTAAGAAAATCGTATCCTATTATTCTGTTTCTTTGGCTCTAACATGGGTTTTAGCAACCATAGTTTCGGTGTACTCAGTGAAGAGAATCCTCAGGGAAAACAGAACGTGGCCTCTTATTTTAACTTTCTGGTGGTTCTTCGCAACTTCATTGAATACACTCTTTGTTTCTCTGAAACTCACCAGGAATTTCAAATCCTTGGATTTGTCTTTTTTCCTGTCAGAGGACAACGTGGTTGATTTCGTTTCCTTTCCTCTGTTGTTACTCATCTGTTTCAATGCTCTGCCTGCTATATGGGTAAGGGAATGCAATGAATCGGAACAAGGCTTGCTTCAGAAGGAGGTAGAAGAAGAAGATGAGGAAGCATTCACAAATGCTGGCATATGGAGCAGACTCACATTTCAATGGCTGAACCCTATTTTTAGGAGGGGTCAGATCCAAAAACTTGAGCTTTCTTATATCCCTTCAGTTCCCCTGTCTGAAACAGCAGAAAATGCTTCGTTGATGCTGGAAGAATCACTTCGAAGACAAAAACTTGAAAAGGGTTCCTTGTCGAAAGCTATTGCCCATTCTATCTGGAAATCCTTGACCTTGAATGCAATATTCGCAGGTGTAAACACAATCGCCTCATATATGGGTCCTTTGTTGATCACAAACTTCGTGAACTTTTTATCGGGAAATTATGGTGATTCAAGCATCCACTATGGGCTTATTCTTGCGTTCATTTTTTTCGTGGCGAAGACTGTGGAATCATTAACTCAAAGACAATGGTACTTTGGTGCTCAACGTATAGGAATTCAAGTGCGTGCAGCTCTGACGGGGCTGATATATAGTATGTCATTGTCAATCAAGTGTGGTGGACCAACAAATGGTAAAATCATAAACTTGGTCAATGTGGATGTTGAAAGAATTGGGGATTTCTGCTGGTACATTCATGGAGTATGGTTGCTTCCAGTTCAGGTCGTTTTGGCTTTGATCATCTTATACAGGAATCTAGGCTTCACGCCTTCCATTGCCGCACTTGCTGTCACTATTTTGGTCATGGTGTGCAATACTCCTATGGCTAATATGCAAGAAAGTCTTCACTCCAAGATCATGGAAGCCAAGGATTCAAGAATCAAAGCGACTTCAGAGACTTTAAAGAACATAAGAATTTTAAAATTGCATTCGTGGGAATCCACATTCTTGAAGAAACTCCTTCAGCTTCGGGAAACTGAGAGGAGCTGGCTTCAGAAATACCTATATACATGCTCAGCAGTGACATTTCTGTTTTGGACATCACCAACTCTTGTTTCTGTGGTCACTTTTGGTGTCTGCATAATGGTGAAAACAGAATTAACAGCAGCTACAGTGCTGTCAGCTTTAGCAACTTTTCGTATCTTACAAGAACCAATCTACAACCTACCTGAGCTTATTTCCATGATAACTCAAACAAAAGTGTCCATTGATCGAATTCAGGAGTTCATTAAAGAAGAGGATCAAAGACAATTCATGATTCAGCATACTTTGAAATCTTCTGACATTGCCATTGAAATCAAAACAGGCGAATATTCATGGGAAGCAGATGATCAATACTACAAGAAACCAACTATTCAAATTACAAAGAAGTTGAAGATAGAGAAAGGTCAAAAGGTTGCAGTTTGTGGGTCAGTGGGATCCGGAAAATCAAGCCTACTGTGCTGTATGCTCGGTGAGATTCCAAGGATTTCCGGGGCAGGAATCAAAGTCTATGGAAATAAAAGTTATGTTCCCCAAAGTCCTTGGATTCAGTCCGGGACTGTGAGGGAAAATATATTATTTGGCAAGAAAATGAACAAGGACTTGTACGAGAATGTTCTGGAATGCTGTGCTTTGTACCAGGATATCGAACTGTGGGCAGATGGAGATTTGACCGTGGTGGGGGAGAGAGGCATAAACTTGAGTGGAGGCCAGAAACAGAGAATTCAACTGGCAAGGGCTGTTTACAATAATTCAGATATTTATTTCCTAGATGATCCTTTCAGTGCTGTTGATGCTCATACTGGAGCTCATTTGTTCAAGAAATGTCTCATGCAACTATTATCTGAGAAAACGGTTGTTTATGCTACCCACCAACTGGAATTTTTGGAAGCTGCGGATCTTATCTTGGTAATGAAAGATGGGAAAATAATTGAGTCAGGAAAGTATAAAGATCTGATAGCATGTCACACTTGTGAACTTGTTGAACAAATGGCTGCTCATAAAGAAACAATAAAGCAAATTAACCCTTGCCACGAGGACAAATCCTTATCCAAGAGCTATGGACCCTGTCAGATAAACCAGATTGAAGTTGCTGAAGTAAATCTTAGTAAGAACCTTGAAGAGGACAGGGAGCCTTTGGCGAGAACCAAAGAAGAGGAAGCAGAGACAGGTCGAGTTGATTGGAGCGTTTACTCAACCTTTGTCACATTTGCTTATAAAGGCGCATTTGTTCCCATTATTCTTCTGTGCCAGATCTTCTTTCAAGGAATGCAAATAGGAAGCAATTATTGGATTGCTTGGGCTGCAGAACAAAGAGGCAGTGTCAGTAATGGGCAGCTTATAGGGACTTTTGTCCTGCTATCTGGTGGCAGCTCCGTCTTCATACTGGGACGTGCTGTTTTAATGGCAACAATTGCTGTAGAGACAGCTCAGCGTCTTTACCATGATATGATTACGTCAATTTTCAGGGCTCCTGTTTCATTTTTTGATACCACCCCTTCAAGCAGAATCTTAAGTAGGTCTTCCACGGATCAAAGTACAGTAGACACAGATGTACCATACAGATTAGCTGGACTTGTATTTGCACTTATCCAGTTATTGAGTATCATCATCCTAATGTCCCAGGTTGCTTGGCAAGTCATTCTTCTCTTTCTCATTGTGCTTGCAATCTCCATCTGGTATCAGGCTTATTACATCACTACTGCCAGAGAATTGGCCAGGATGGTAGGGATTAGGAAGGCTCCAATCTTGCATCACTTCACAGAAACAATTGCTGGGGCAGCCACAATCCGTTGTTTCAATCAAAAGCAAAGATTTTTTAGGAAAGTTATGGCTCTAATTGATGATTATTCTCGTGTAGCATTTCACAATTATGCCACCATGGAATGGTTGTCAGTTCGAATAAACTTTCTCTTTAACCTGGTCTTCTTTTTTGTTCTTATAATCTTGGTTACTCTGCCAAGGTCTGCCATTGATCCCAGCTTGGCAGGTTTGGTAGCAACTTACGGTTTGAACTTGAGTGTTCTTCAGGCTTGGGTGATATGGAACCTTTGCAATGTGGAGAACAAAATGATATCAGTTGAGAGAATACTGCAGTTCACTAATATACCAAGTGAAGCGCCATTAATAATTCAGGATTGTAGGCCCCAGCTGGAGTGGCCAAGGGAGGGAGAAATTGAACTTCATAACCTCCATATACAGTATGATCCTACAGCTCCTATGGTTCTCAAAGGTATCACTTGCACCTTTCCGGGACAAAAGAAAATTGGAGTTGTAGGAAGGACAGGGAGTGGAAAATCCACTTTAGTGCAAGCTCTCTTTCGAGTGGTGGAGCCTTCATTAGGATGGATACTCATTGACAATGTAGATATTTGCAAGATTGGCCTGGAGGATTTGAGATCTAGGCTTGGTATAATTCCCCAAGATCCTACCTTGTTTCAAGGTACTGTAAGGAACAACTTAGATCCTCTGGAACAACATTCAGATCAAGAACTTTGGGAGGTTCTCGGTAAGTGCCATCTTGCTGAAATAGTGAGGAAGGATGCAAGGCTTCTTGATGCATCAGTGGCTGAGAATGGAGAGAATTGGAGTGTTGGACAAAGGCAGCTTGTTTGCCTTGCCAGATTGCTGTTGAAGAAAAGAAAAATTTTGGTTCTAGATGAAGCAACTGCATCCATTGATACGGCAACTGATAATTTAATTCAAAAGACTATCAGAGAAGAGACTAGTGAATGCACAGTCATTACAGTGGCACACAGGATTCCTACAGTTATCGATAATGACTATGTATTGGTCCTTGATGAAGGGAAAATTGCAGAGTTTGATCGCCCAGCTCAATTGCTACAGAACAATTCTTCTTCATTCTCAAAGCTGGTGTCAGAATTTTTGAGGAGATCATCCCAAAATAATCGCCAAAAGTATACAGTTTGA 4371 0.4095 MAVVLDTPLGVLNAAFFIAILIWVLLDSLRESKRNGVEYLKHVPKRFAVLSSITLACDTILSVLNFAFAFHEFKSKKIVSYYSVSLALTWVLATIVSVYSVKRILRENRTWPLILTFWWFFATSLNTLFVSLKLTRNFKSLDLSFFLSEDNVVDFVSFPLLLLICFNALPAIWVRECNESEQGLLQKEVEEEDEEAFTNAGIWSRLTFQWLNPIFRRGQIQKLELSYIPSVPLSETAENASLMLEESLRRQKLEKGSLSKAIAHSIWKSLTLNAIFAGVNTIASYMGPLLITNFVNFLSGNYGDSSIHYGLILAFIFFVAKTVESLTQRQWYFGAQRIGIQVRAALTGLIYSMSLSIKCGGPTNGKIINLVNVDVERIGDFCWYIHGVWLLPVQVVLALIILYRNLGFTPSIAALAVTILVMVCNTPMANMQESLHSKIMEAKDSRIKATSETLKNIRILKLHSWESTFLKKLLQLRETERSWLQKYLYTCSAVTFLFWTSPTLVSVVTFGVCIMVKTELTAATVLSALATFRILQEPIYNLPELISMITQTKVSIDRIQEFIKEEDQRQFMIQHTLKSSDIAIEIKTGEYSWEADDQYYKKPTIQITKKLKIEKGQKVAVCGSVGSGKSSLLCCMLGEIPRISGAGIKVYGNKSYVPQSPWIQSGTVRENILFGKKMNKDLYENVLECCALYQDIELWADGDLTVVGERGINLSGGQKQRIQLARAVYNNSDIYFLDDPFSAVDAHTGAHLFKKCLMQLLSEKTVVYATHQLEFLEAADLILVMKDGKIIESGKYKDLIACHTCELVEQMAAHKETIKQINPCHEDKSLSKSYGPCQINQIEVAEVNLSKNLEEDREPLARTKEEEAETGRVDWSVYSTFVTFAYKGAFVPIILLCQIFFQGMQIGSNYWIAWAAEQRGSVSNGQLIGTFVLLSGGSSVFILGRAVLMATIAVETAQRLYHDMITSIFRAPVSFFDTTPSSRILSRSSTDQSTVDTDVPYRLAGLVFALIQLLSIIILMSQVAWQVILLFLIVLAISIWYQAYYITTARELARMVGIRKAPILHHFTETIAGAATIRCFNQKQRFFRKVMALIDDYSRVAFHNYATMEWLSVRINFLFNLVFFFVLIILVTLPRSAIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLIIQDCRPQLEWPREGEIELHNLHIQYDPTAPMVLKGITCTFPGQKKIGVVGRTGSGKSTLVQALFRVVEPSLGWILIDNVDICKIGLEDLRSRLGIIPQDPTLFQGTVRNNLDPLEQHSDQELWEVLGKCHLAEIVRKDARLLDASVAENGENWSVGQRQLVCLARLLLKKRKILVLDEATASIDTATDNLIQKTIREETSECTVITVAHRIPTVIDNDYVLVLDEGKIAEFDRPAQLLQNNSSSFSKLVSEFLRRSSQNNRQKYTV 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0112 1456 Gene3D - 602 834 IPR027417 -
Dere03g0112 1456 Gene3D - 1189 1442 IPR027417 -
Dere03g0112 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 802 IPR027417 -
Dere03g0112 1456 Pfam ABC transporter transmembrane region 271 538 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere03g0112 1456 Pfam ABC transporter transmembrane region 911 1133 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere03g0112 1456 CDD ABCC_MRP_domain1 584 789 - -
Dere03g0112 1456 ProSitePatterns ABC transporters family signature. 714 728 IPR017871 GO:0005524|GO:0016887
Dere03g0112 1456 SUPERFAMILY ABC transporter transmembrane region 893 1188 IPR036640 GO:0005524|GO:0016020
Dere03g0112 1456 CDD ABCC_MRP_domain2 1204 1424 - -
Dere03g0112 1456 FunFam Multidrug resistance-associated protein 4 569 829 - -
Dere03g0112 1456 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 893 1169 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere03g0112 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1198 1432 IPR027417 -
Dere03g0112 1456 Gene3D ABC transporter type 1, transmembrane domain 261 570 IPR036640 GO:0005524|GO:0016020
Dere03g0112 1456 SMART AAA_5 1232 1434 IPR003593 GO:0016887
Dere03g0112 1456 SMART AAA_5 615 789 IPR003593 GO:0016887
Dere03g0112 1456 CDD ABC_6TM_ABCC_D1 272 559 IPR044746 GO:0140359
Dere03g0112 1456 Gene3D ABC transporter type 1, transmembrane domain 855 1187 IPR036640 GO:0005524|GO:0016020
Dere03g0112 1456 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 274 551 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere03g0112 1456 FunFam ABC transporter C family member 10 254 567 - -
Dere03g0112 1456 CDD ABC_6TM_ABCC_D2 891 1181 IPR044726 GO:0140359
Dere03g0112 1456 FunFam ABC transporter C family member 5 854 1187 - -
Dere03g0112 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1206 1440 IPR003439 GO:0005524
Dere03g0112 1456 FunFam ABC transporter C family member 3 1189 1441 - -
Dere03g0112 1456 Pfam ABC transporter 1223 1371 IPR003439 GO:0005524
Dere03g0112 1456 SUPERFAMILY ABC transporter transmembrane region 264 566 IPR036640 GO:0005524|GO:0016020
Dere03g0112 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 577 812 IPR003439 GO:0005524
Dere03g0112 1456 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 198 1445 - -
Dere03g0112 1456 Pfam ABC transporter 610 741 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0112 Dere-ChrDere03 4491065 4498052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0112 1191 1453 Calmodulin-binding Proteins AT2G36910 30.216 1.03e-30 130