Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0108 ATGCATGTCAATAATGTTATTTGCATCATGTTCATGTTTTGTTCTTTATTAATTTAATACAGGCTATTTACTATGACTCTTCCCTATGCAATGTTTTGCACTTCTACCATAATATTTTATGGCAAAAAAGTGTTCAAATTAATCAGTGGGAAGGATATAATCGGAATAGGATGTCCTGATAAATGCCTCGACGTCAAATTTCCCGCCATTTCCTTTGCTTACCTTACTCCTCACATCAGAGAAACCCTAGACCAGGAGCACAGAGAGATGGCAATGGAAGAGGAAATCAAGACAGAATTCAGGAAAAGCGGGTTTGATCTCGACGATGAAGAAGAAATACTAAAGAAATGTCTTCCTTTTTGCGTAAACTACGGTCTCAAGCCTTCAGATCTCGTTTCAAGTTGGGAGGTTTATTATCTAAACAGACAGTTGAATGAACCAATAGTTCAAAATGCTGAAATGGATGGCTTTTTGGTACACCTACAAAATGAGCAGAAAGAAGCTGCTATCAAGGAGGAAACTGATATTCATATTTACTCAAGTAGAGATGTAGAAATGGTCTTAAATGATGATGATGAGGTTTCAAAGGATAATGCTCCTGGAACTCCAATGGACCACCAGCAATATGTTTGTTCAACTGCATGTGATTCAACCTCTCTAACAAATGGGAAAGTTTTATCTTCTGGGAAATCATCAAAACTTGTGACACCATTTTGTAAGCGAACAAATAGGTTTGAGGTGAAGTTCAGCATCAACAACATGCCTAATCTAGAAATTGGAAAACAAGAACCTGGTCATGAGAATGATGAGGACGACATTGTCAGAAAGGTTCTTCCACGCAAAAGGTGTTCATTGGTGATTCATGGATCAGGGCCTAGATCAGGTTGTAGATTCATGTATGATAGGACTGAAGATAGGTTTAATGCATTAGAAAACCGAATCAGGAAACATACAAGGGCACTTGTGGCTTCTGGGCTCTATGAAGAACCAATGGACCCTACAATTGCTTCACAGAGAAGCATTTTCACTGTTGGCATGATTTGTTGTGATGGAGAAGGCCGTCTAAACGAAAAGTCTGTCATGCTGCAGAGCAGTGCTGAGCATTCTGGAGGGCAACGTGTTCGCCTAGAATTACAACAACTAAGCCACTTCTCGGTTTTCCCAGGCCAGGTTGTTGGTATTGAAGGGCATAATCCTAGTGGCCACTGTTTAGTTGCATCAAAATTGGTGGATTCTATAGTTTCCTCCGTTCTTGATAATGAGAATTTGAATCCAGCAAAGAAGCAAGCCTTCGATAAGGAGAATCAGCCAACTGATCCGCCTAGCAAGCAGAGAGAGTTATCAATGGTTATTGCAGCAGGCCCTTTTACAACCACAGACAATTTGTTGTTTGAGCCTCTTGCAGAATTGCTGGCATATGGAAAGATAAGACGGCCACAGTTAATTGTATTGATGGGACCATTTATTGATACTGAACACCCAGACATTAAAAAGGGAACCATAGACAGGAGCTTTGATGAAATATTTCATTTTGAAATCCTCAGAAGGTTGGAAGAGTATGTAGAATCTATGGGCTCCGCAGCACGCATCCTTCTTGTACCATCTGTAAGAGATGCTAACCATGATTTTGTTTTCCCACAGCCTGCACTTGATATCAATCTATCTGATCCCAAACCTCAGATAGCCAGTCTCACTAATCCTGGAATCTTCAAGGCAAACGAGGTCAAGGTTGGTTGCTGCACTGTGGATATACTCAAGCAGCTCAGTGGGGAGGAGATATCACGAATTTCAGCAGATGGAAAATCTAGCGATCGCATGAGTAGACTTGTAAACCATATTCTTAAACAACAAAGCTTTTATCCTCTTTATCCACCGGCAGAAGGTGTTCCTTTGGACTTTTCTCTTGCTCCAGAAGCTCTTCAACTCTCGTTGGTTCCTGATGTTCTCATTTTGCCTTCAGACATTAAGTATTTTGTCAAGGTGCTTAGTGAAGAAAGTGAAGGTAACCACATGAAGTGCGTTTTTGTCAATCCAGGAAGACTGGCCAAGGGCGAAGGTGGGGGTACTTTCGCCGAGCTTGACTTCTATGGGGGTCCCGACACAATCAATGCTTCAATTGTTGGCATTTAA 2130 0.4113 MHVNNVICIMFMFCSLLIXYRLFTMTLPYAMFCTSTIIFYGKKVFKLISGKDIIGIGCPDKCLDVKFPAISFAYLTPHIRETLDQEHREMAMEEEIKTEFRKSGFDLDDEEEILKKCLPFCVNYGLKPSDLVSSWEVYYLNRQLNEPIVQNAEMDGFLVHLQNEQKEAAIKEETDIHIYSSRDVEMVLNDDDEVSKDNAPGTPMDHQQYVCSTACDSTSLTNGKVLSSGKSSKLVTPFCKRTNRFEVKFSINNMPNLEIGKQEPGHENDEDDIVRKVLPRKRCSLVIHGSGPRSGCRFMYDRTEDRFNALENRIRKHTRALVASGLYEEPMDPTIASQRSIFTVGMICCDGEGRLNEKSVMLQSSAEHSGGQRVRLELQQLSHFSVFPGQVVGIEGHNPSGHCLVASKLVDSIVSSVLDNENLNPAKKQAFDKENQPTDPPSKQRELSMVIAAGPFTTTDNLLFEPLAELLAYGKIRRPQLIVLMGPFIDTEHPDIKKGTIDRSFDEIFHFEILRRLEEYVESMGSAARILLVPSVRDANHDFVFPQPALDINLSDPKPQIASLTNPGIFKANEVKVGCCTVDILKQLSGEEISRISADGKSSDRMSRLVNHILKQQSFYPLYPPAEGVPLDFSLAPEALQLSLVPDVLILPSDIKYFVKVLSEESEGNHMKCVFVNPGRLAKGEGGGTFAELDFYGGPDTINASIVGI 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0108 709 Gene3D - 90 155 IPR043034 -
Dere03g0108 709 Gene3D - 603 704 - -
Dere03g0108 709 Gene3D - 429 596 - -
Dere03g0108 709 Coils Coil 300 320 - -
Dere03g0108 709 Pfam DNA polymerase alpha/epsilon subunit B 450 660 IPR007185 GO:0003677|GO:0006260
Dere03g0108 709 FunFam DNA polymerase alpha subunit B 91 166 - -
Dere03g0108 709 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 92 695 IPR016722 -
Dere03g0108 709 FunFam DNA polymerase alpha subunit B 430 595 - -
Dere03g0108 709 PIRSF DNA_pol_alpha_2 90 699 IPR016722 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0108 90 709 Core DNA Replication Machinery Family AT1G67630 57.717 0.0 741