Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0082 ATGATGCGGGCCCTAACCCTATTTATGTTGCTTAAATTGTTACGAGATGAGCAGAGATCTAATGAAGTCGCTCTCGAGATTGATGTGATGTGTATGCAGTCTCATAGATTAGGCCCATTAAGAGGAGAGGTTGGCCTATTGAGGCATGTTAGACTTAGCCCAAAACATACTTTATCATTGCATTTTTGCCTTTCTTTTGTCTTTTCCATTCCCACTCGTCCATCGCACTCACCAACCAGCACCATGGCTTCTGCTTATGCTTCCTCTGCCATTGCAGCTATTGCCACTTATTCCCCAAGTTCCCAGAAGAACGGATCAGTGTTGGGGACAACAAAAGCTTCTTTCGTTAGTGGGAGAAAACTGAAGGTGAACAAGTTCAGATCACCTGCAAGATCAGGATCAGTCACTACGGTGTGTGCAGTAGCTGACCCTGACAGGCCTCTCTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTAGATGGCAGCCTTCCTGGTGACTTCGGCTTCGATCCTCTTGGCCTTGGATCCGATCCGGAGAGTCTGAGATGGAATGTTCAAGCAGAGCTAGTGCATTGCAGGTGGGCGATGCTGGGAGCTGCGGGTATCTTCATCCCAGAATTCTTGACGAAGATTGGGATTCTAAATACGCCTTCCTGGTACACTGCGGGAGAGCTGGAGTACTTCACGGACACTACCACCCTCTTCGTGATAGAGCTGATTCTGATTGGGTGGGCCGAGGGTAGAAGATGGGCCGACATCATCAAGCCCGGCAGCGTCAACACCGATCCCATCTTCCCCAACAACAAGCTCACCGGCACCGACGTTGGGTACCCCGGTGGGCTGTGGTTCGACCCCTTGGGCTGGGGAAGTGGGTCCCCCGAGAAGGTGAGGGAGCTGAGAACCAAGGAGATCAAGAATGGCAGATTGGCCATGTTGGCTGTCATGGGTGCTTGGTTCCAGCACATTTATACTGGCACTGGTCCCATTGATAACCTCTTTGCCCACCTTGCTGATCCTGGACATGCCACCATTTTTGCTGCTTTCACTCCCAAGTGA 1056 0.5152 MMRALTLFMLLKLLRDEQRSNEVALEIDVMCMQSHRLGPLRGEVGLLRHVRLSPKHTLSLHFCLSFVFSIPTRPSHSPTSTMASAYASSAIAAIATYSPSSQKNGSVLGTTKASFVSGRKLKVNKFRSPARSGSVTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFVIELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVRELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0082 351 Gene3D Chlorophyll a/b binding protein domain 156 341 - -
Dere03g0082 351 FunFam Chlorophyll a-b binding protein, chloroplastic 156 341 - -
Dere03g0082 351 Pfam Chlorophyll A-B binding protein 155 321 IPR022796 -
Dere03g0082 351 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 97 349 IPR001344 GO:0009765|GO:0016020
Dere03g0082 351 SUPERFAMILY Chlorophyll a-b binding protein 142 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0082 Dere-ChrDere03 4157129 4159625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0082 129 351 Chloroplast and Mitochondria Gene Families AT3G61470 90.625 5.69e-150 421