Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere03g0070 | ATGGCAGAGGAGCACTTCATGTATAAACCGTATCCACCAAATGGAGAAGAGAGCACACTCTTTGTACACGTAGGAAAGAGAAGGTCACAAATTTTCTTTATCCCTTACTGGAGTGTACCAGACACATCTCCAAACATAACCCAATATGCACATTACACGTTGGGCAATGTGATTGGCAGAAATACAGAACCGTGTGACGGCTTATTTTACTATGGGGGTGGTTTTAACTTGAGCAAATTTTTACTTCTTGTTGGTGAAGCTGAAAACAAAACAGTTGGAGAGTCTAAGTTCAGTGGAAGGCTGGATCAGGAAGGCCAGCTAGGTTACAATCATGCGTGCTTGATCTCTTTACCTACTCTTTTGACTCTTGGTCCTCCCATGGCAATATTGGAAAAGTACGGGGTATCTAATGCCATTCGGCAGAGAATCACCGGTCTAGAATTCTGTTTACTAGGTTTAAACCACGGAGATTCTGTGGATTTGACAGTGGTTCTCTCATTAGCCTACCTGGAATTAGCTAGAAGTGATACCCGCTGCCTCCTGGAACTGTTTCTTGTTAACTTGTGTTGGTTACTGTTGTGGATGAGTTTGCTCTATGTAGTTGGGTTTGGTCCAAAGGTGGGGCATCTACTTTTGGTGCTGTGTTGCTGGATTGTGTCTGTCATATACATGAGCTGGTTCAACAACGGTGGAATTATGGACACCAAGGTTGGTTTTCTTGGTGGTGGTGGAAAGATATGGCTCAAGTGGTGGGAGAAGATCTCAGGGAATAGTTGTAAAATCCACCAACACTACTACCAGTATATTGGGTCCAAGAAAGTGAAGAGAACTCTGTGGAGAAAGCTTTTGCTGACATGGGTACTGGGATGGACCATGGTATCTTTGTGGATCCTCTGCTACATGACCTTTCAAGCAACTGAGAAGAGGAAAGAGACTCTGGCGAGTATGTGTGATGAGAGGGCTAGGATGCTTCAGGATCAGTTTAATGTTAGTATGAACCATATCCAAGCCATGTCAATTCTCATCTCAACCTTCCACCATGCCAAGTCGCCCTCTGCCATCGATCAGAGAACATTTGCTAGGTACACAGAACGAACTGCTTTTGAGAGGCCCCTTACAAGTGGTGTTGCGTATGCTGTGAGGGTGCTCCATTCTGAAAGGGAACAATTCGAGAAGCAACAAGGGTGGACCATTAAGAGGATGGATACCCTTGAGCAGAACCCCGTTCATAAGGATGACTACGCCCCTGAGGCATTGGAGCCTTCCCCCGTTCGGGAAGAATATGCTCCTGTCATTTTTGCACAGGATACAATTTCCCATGTCATTTCTGTCGATGTGCTTTCCGGAAAGGAAGATCGTGAAAATGTGTTGCGTGCAAGAGAATTAGGGAAAGGGGTTTTAACTGCTCCTTTTAGGCTGCTCAAAACAAATCGTCTGGGAGTTATACTCACATTTGCTGTCTACAAGACAGATCTTCCATCAAATGCAACCCCAAACGAAAGGATCCAAGCAACAGATGGATATCTTGGTGGCGTCTTTGATATTGAGTCATTGGTGGAAAAATTACTTCAACAACTTGCTAGCAAGCAAACTGTAATTGTTAATGTATATGATACTACTAATCATTCCCAACCTATTCCCATGTATGGTTCAAATGTGTCAGATGACGGATTCCATCATGTCAGCTCCCTGAACTTTGGAGATCCTTTCCGGAAGCATGAGATGCACTGCAGGTTCAAACAGAAACCTCCGTGGCCATGGTTGGCAATTACTACATCAATTGGTATCCTTGTCATTGCACTCCTTGTAGGGCATATTTTCCATGCTACTGTGAATCGAATTGCTAAAGTGGAGGAGGATTACCGTGAGATGATGGAACTTAAAAAACGAGCTGAGGCAGCTGATGTTGCAAAATCTCAGTTCCTGGCTACTGTTTCCCATGAGATCAGAACACCAATGAATGGTGTTCTTGGAATGTTGCATATGCTTATGGACACAGATCTAGATGTAACACAGCAGGAATACGTCAGAACAGCACAGGGTAGTGGAAAAGCTCTAGTGTCACTTATAAATGAGGTTTTGGACCAGGCAAAGATTGAATCTGGTAAGCTAGAGCTTGAGGCAGTGCTGTTTGACCTACGAGCAGTTTTGGATGATGTGTTGTCACTATTCTCTGAGAAATCTCAAGAAAAAGGAGTAGAGTTGGCAGTTTATATCTCAGATCAGGTTCCTGAACTGCTAGTAGGTGATCCAGGAAGGTTTCGGCAAATAATTACCAATCTCATGGGTAACTCAATTAAGTTCACGGACAAAGGACACATCTTTGTCACTGTCCATCTTATTGAGGAGGTTGTGAACTCAATTGAAGTTGCAACGTCAAAGAATACCTTGAGTGGCTTTCCTGTTGCTGACAGGCGCCAAAGTTGGAAAGGATTCAATACCATCAGTCAAGAGGGACCTCTTGGTTCTTTCTCATCTTCCTCCTCTGATTGCATTACTCTTATTGTATCAGTTGAGGATACAGGCGAAGGTATTCCTCTGGAAGCTCAATCCCGCATATTCACTCCTTTCATGCAGGTAGGTCCTTCCATCTCCCGGAAACATGGGGGAACAGGTATTGGGCTAAGCATTAGCAAGTGTTTGGTTGGCCTCATGAATGGGGAAATTGGATTTGTGAGCACACCCAAGATTGGATCAACTTTCACATTTACAGCTGTCCTCACCAATGGATCCCCCATTTCAAATGAGGGAAAAAGTCAGCAAATTAACAACCAACCTAACCTTGCATCCTCAGAATTTCAGGGCATGACAGCACTAGTTATAGACCCCAGACCTGTCAGAGCTAAAGTGTCGAGATATCACATTCAGCGGCTTGGCATTCATGTCGAAATAGCTTCAGATTTAAATCAAGGTTTGTCCATGATAAGCAGTGGGAATATAGTTATTAATATGATCCTGGTCGAACATGAGGTCTGGGATAGGGATTCTGGCATTTCGTCTCAGTTTATCAATAACACAAGGAAAATTGATCGTGGGGTTCCTCCAAAGCTGTTCATTCTCGTTAATTCTGGTAGTTCTTCTAAGTCAAGTTCTATAACATCTGGTGTTCATAATCCTACTGTCATTACAAAACCTTTGAGAGCAAGTATGCTTGCTGCTTCACTACAGCGAGCTATGGGTGTTGGGAACAAGGGGAATTCTCGAAATGGGGAGCTCCCAAGTTTGTCTCTCCGCCGTCTTCTGCTTGGAAGAAAAATCCTCATTGTAGATGACAACAGTGTGAATCGAACTGTAGCAGCTGGAGCTTTAAAAAAGTATGGAGCTGATGTGGTTTGTGTTAACAGTGGAAAAGACGCCATCTCTTTGCTGAAGCCACCCCATCAATTTGATGCCTGTTTCATGGATATTCAAATGCCAGAGATGGATGGGTTTGAAGCTACTAGCAGGATTCGGGAGATGGAACATCTTGTAAACAACGGAGAAATGCCTGTGGAAGCCTCGGAGAATATCTCAAACTGGCATGTACCCATTTTGGCCATGACAGCAGACGTTATTCAGGCAACACATGAGAAATGTCTGAGGTGTGGAATGGACGGATATGTTTCAAAACCTTTTGAAGCTGAACAGCTTTATCGGGAAGTTTCACGGTTTTTCCAATCATCTTGA | 3666 | 0.4375 | MAEEHFMYKPYPPNGEESTLFVHVGKRRSQIFFIPYWSVPDTSPNITQYAHYTLGNVIGRNTEPCDGLFYYGGGFNLSKFLLLVGEAENKTVGESKFSGRLDQEGQLGYNHACLISLPTLLTLGPPMAILEKYGVSNAIRQRITGLEFCLLGLNHGDSVDLTVVLSLAYLELARSDTRCLLELFLVNLCWLLLWMSLLYVVGFGPKVGHLLLVLCCWIVSVIYMSWFNNGGIMDTKVGFLGGGGKIWLKWWEKISGNSCKIHQHYYQYIGSKKVKRTLWRKLLLTWVLGWTMVSLWILCYMTFQATEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKSPSAIDQRTFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDTLEQNPVHKDDYAPEALEPSPVREEYAPVIFAQDTISHVISVDVLSGKEDRENVLRARELGKGVLTAPFRLLKTNRLGVILTFAVYKTDLPSNATPNERIQATDGYLGGVFDIESLVEKLLQQLASKQTVIVNVYDTTNHSQPIPMYGSNVSDDGFHHVSSLNFGDPFRKHEMHCRFKQKPPWPWLAITTSIGILVIALLVGHIFHATVNRIAKVEEDYREMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQQEYVRTAQGSGKALVSLINEVLDQAKIESGKLELEAVLFDLRAVLDDVLSLFSEKSQEKGVELAVYISDQVPELLVGDPGRFRQIITNLMGNSIKFTDKGHIFVTVHLIEEVVNSIEVATSKNTLSGFPVADRRQSWKGFNTISQEGPLGSFSSSSSDCITLIVSVEDTGEGIPLEAQSRIFTPFMQVGPSISRKHGGTGIGLSISKCLVGLMNGEIGFVSTPKIGSTFTFTAVLTNGSPISNEGKSQQINNQPNLASSEFQGMTALVIDPRPVRAKVSRYHIQRLGIHVEIASDLNQGLSMISSGNIVINMILVEHEVWDRDSGISSQFINNTRKIDRGVPPKLFILVNSGSSSKSSSITSGVHNPTVITKPLRASMLAASLQRAMGVGNKGNSRNGELPSLSLRRLLLGRKILIVDDNSVNRTVAAGALKKYGADVVCVNSGKDAISLLKPPHQFDACFMDIQMPEMDGFEATSRIREMEHLVNNGEMPVEASENISNWHVPILAMTADVIQATHEKCLRCGMDGYVSKPFEAEQLYREVSRFFQSS | 1221 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere03g0070 | 1221 | PRINTS | Bacterial sensor protein C-terminal signature | 869 | 887 | IPR004358 | GO:0016310|GO:0016772 | |
Dere03g0070 | 1221 | PRINTS | Bacterial sensor protein C-terminal signature | 893 | 906 | IPR004358 | GO:0016310|GO:0016772 | |
Dere03g0070 | 1221 | PRINTS | Bacterial sensor protein C-terminal signature | 852 | 862 | IPR004358 | GO:0016310|GO:0016772 | |
Dere03g0070 | 1221 | PRINTS | Bacterial sensor protein C-terminal signature | 834 | 848 | IPR004358 | GO:0016310|GO:0016772 | |
Dere03g0070 | 1221 | CDD | REC_hyHK_CKI1_RcsC-like | 1086 | 1214 | - | - | |
Dere03g0070 | 1221 | Pfam | His Kinase A (phospho-acceptor) domain | 637 | 702 | IPR003661 | GO:0000155|GO:0007165 | |
Dere03g0070 | 1221 | Gene3D | - | 605 | 700 | - | - | |
Dere03g0070 | 1221 | Gene3D | - | 701 | 910 | IPR036890 | - | |
Dere03g0070 | 1221 | SMART | HKATPase_4 | 749 | 909 | IPR003594 | - | |
Dere03g0070 | 1221 | SUPERFAMILY | CheY-like | 1083 | 1218 | IPR011006 | - | |
Dere03g0070 | 1221 | CDD | HATPase_EvgS-ArcB-TorS-like | 754 | 907 | - | - | |
Dere03g0070 | 1221 | Pfam | CHASE domain | 353 | 549 | IPR006189 | - | |
Dere03g0070 | 1221 | SMART | REC_2 | 1084 | 1214 | IPR001789 | GO:0000160 | |
Dere03g0070 | 1221 | Pfam | Response regulator receiver domain | 1086 | 1213 | IPR001789 | GO:0000160 | |
Dere03g0070 | 1221 | SUPERFAMILY | CheY-like | 932 | 1060 | IPR011006 | - | |
Dere03g0070 | 1221 | Coils | Coil | 614 | 634 | - | - | |
Dere03g0070 | 1221 | ProSiteProfiles | Response regulatory domain profile. | 937 | 1059 | IPR001789 | GO:0000160 | |
Dere03g0070 | 1221 | ProSiteProfiles | Response regulatory domain profile. | 1085 | 1218 | IPR001789 | GO:0000160 | |
Dere03g0070 | 1221 | FunFam | Histidine kinase 4 | 354 | 583 | - | - | |
Dere03g0070 | 1221 | FunFam | Histidine kinase 4 | 609 | 700 | - | - | |
Dere03g0070 | 1221 | Gene3D | CHASE domain | 354 | 583 | IPR042240 | - | |
Dere03g0070 | 1221 | Gene3D | - | 933 | 1064 | - | - | |
Dere03g0070 | 1221 | Gene3D | - | 1081 | 1221 | - | - | |
Dere03g0070 | 1221 | SMART | HisKA_10 | 637 | 702 | IPR003661 | GO:0000155|GO:0007165 | |
Dere03g0070 | 1221 | Gene3D | - | 301 | 353 | - | - | |
Dere03g0070 | 1221 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 749 | 908 | IPR003594 | - | |
Dere03g0070 | 1221 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 691 | 904 | IPR036890 | - | |
Dere03g0070 | 1221 | CDD | PRTases_typeI | 1038 | 1113 | IPR000836 | - | |
Dere03g0070 | 1221 | ProSiteProfiles | CHASE domain profile. | 350 | 576 | IPR006189 | - | |
Dere03g0070 | 1221 | SMART | CHASE_2 | 350 | 551 | IPR006189 | - | |
Dere03g0070 | 1221 | ProSiteProfiles | Histidine kinase domain profile. | 644 | 909 | IPR005467 | - | |
Dere03g0070 | 1221 | CDD | HisKA | 637 | 698 | IPR003661 | GO:0000155|GO:0007165 | |
Dere03g0070 | 1221 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 284 | 1211 | - | - | |
Dere03g0070 | 1221 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 622 | 703 | IPR036097 | GO:0000155|GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere03g0070 | Dere-ChrDere03 | 4061270 | 4068154 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere03g0070 | 195 | 1220 | Miscellaneous Gene Families | AT1G27320 | 69.761 | 0.0 | 1443 |