Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0055 ATGGCAGAGAACAAGGCTGTAGAAATCAATGACTTTCAGATTATGATTGCAAACAAAGACGATGAAAAGAAACAGTTGGCACCAAAGAGAGGTGCCAGCAAGGACCGTCACAAAAAAGTAAATGGCAGAGGCAGAAGAATAAGGATGCCAGCTCTGTGCGCCGCGAGGGTTTTCCAATTAACAAGAGAATTGGGTCATAAGTCTGATGGCGAGACGATTCAGTGGCTGCTGCAACAAGCGGAACCCTCCATCGTTGCAGCAACTGGTAGTGGCACTATCCCAGCTTCCACTCTTTCAGAAGCAGGATCCTCTATTTCTGAACAGAGAAGCGCTGTATCAGCTGGTTTGCACGCAAAGTTGGACGCTTTAGGACCAAGCTGGACTAAGGTGAACGGAAATTTGGGAAGAACACTAGTCACAAATGGGGTTTGGCAAAGTCTTAGTGGAATTGGTTCTGGAGTTATCCAAAACTGTGGTTATTTGAGTTCGAGTTCTGGTTTTGAAATTGGTCGGATGAATACGGGTTTGACGACCAATTTGGGTGGAGCAGACCAGCAAGTTCCAGGTTTAGAACTTGGTCTATCACAGGATGGTCATATTAGGCTTTTAACATCGGAAGCCATGGTCCAGTTTTACCAGCACTCAGGACAGAGCCGTGAAGGTGCAGCGTCGTTGGAACCCACTCAGAAGGATCATACTCAGGGATTGAAGCAGTGA 717 0.4672 MAENKAVEINDFQIMIANKDDEKKQLAPKRGASKDRHKKVNGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSIVAATGSGTIPASTLSEAGSSISEQRSAVSAGLHAKLDALGPSWTKVNGNLGRTLVTNGVWQSLSGIGSGVIQNCGYLSSSSGFEIGRMNTGLTTNLGGADQQVPGLELGLSQDGHIRLLTSEAMVQFYQHSGQSREGAASLEPTQKDHTQGLKQ 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0055 238 MobiDBLite consensus disorder prediction 22 45 - -
Dere03g0055 238 MobiDBLite consensus disorder prediction 30 45 - -
Dere03g0055 238 ProSiteProfiles TCP domain profile. 33 87 IPR017887 -
Dere03g0055 238 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 111 IPR005333 GO:0003700
Dere03g0055 238 Pfam TCP family transcription factor 33 117 IPR017887 -
Dere03g0055 238 MobiDBLite consensus disorder prediction 218 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0055 Dere-ChrDere03 3935564 3936280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0055 3 212 TCP Transcription Factor Family AT3G27010 48.101 8.85e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere03g0055 TCP 4.9e-30 No_clan