Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0046 ATGGGCTGTTTTTCGTGTTTCGATTCGAAGGAGGACGAGAAGCTAAATCCTCAACAAGAAACCGTTGATCGTAAGCAAGGCCATCCAACCGTCCCCTCTCACATTTCCAGATTGCCCTCCGGAGCAGACAAGCTTCGCTCAAGAAGTAATGGAGGATCCAAAAGGGAACTGCCTGCCCCTAAGGATGTGCCTGGTGTCCAAATTGCCGCTCAAACTTTTACTTTTCGTGAACTTGCAGCTGCAACTAAAAACTTTAGGCCCGAGTCCTTTATAGGGGAAGGTGGTTTTGGGAGGGTGTATAAAGGGCGCCTGGAAAGCACGGGTCAGGTTGTTGCTGTTAAACAATTAGATAGAAATGGTCTTCAGGGTAATAGAGAATTCCTTGTGGAGGTTCTCATGCTCAGTCTACTACATCATCCTAATCTTGTGAATCTTATTGGTTACTGTGCTGATGGGGACCAACGCCTCCTTGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCATGATCTTCCCCCTGAAAAGGAACCACTAGATTGGAGCACTAGGATGAAAATAGCAGCTGGTGCAGCAAAAGGATTGGAATACTTGCATGACAAGGCAAATCCTCCTGTTATTTATAGGGACTTCAAGTCATCCAATATATTACTAGATGAAGGATTTCATCCAAAACTTTCTGACTTTGGTCTTGCAAAGCTTGGGCCGGTTGGTGATAAGTCACACGTTTCCACCAGAGTCATGGGAACTTATGGTTATTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTGAAGTCTGATGTCTATAGTTTTGGGGTAGTCTTCTTGGAGTTGATTACTGGCCGGAAAGCCATTGACAGTAGCCGGCCCCATGGAGAACAGAACCTCGTTACATGGGCACGTCCACTGTTCAATGACCGCAGGAAGTTTTCAAAGTTGGCAGATCCAAGGCTGCAGGGACGGTATCCCATGCGGGGTCTTTACCAGGCATTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCTGCTACACGTCCTCTAATTGGGGACGTGGTTACAGCTCTATCCTATCTGGCCAACCAGGCATATGACCCTAACGCAGCCGGGCATGGTTATAAGGGTTCTGGTGATGATAAAAGGAATAGAGACGATAGAGGTGGAAGGATATCCAAAAATGAGGAAGGCGGAGGATCTGGACGCAGATGGGACTTGGAAGGATCTGAGAAAGATGAGTCCCCGAGGGAAACTGCGAGGATGTTAAACAGGGATCTAGATCGAGAACGAGCAGTGGCAGAAGCCAAGATGTGGGGAGAGAACTGGAGAGAAAAAAGACGGCAAAATGTGCAGGGCAGTTTTGATGCTTCCAACGCTTAG 1386 0.4719 MGCFSCFDSKEDEKLNPQQETVDRKQGHPTVPSHISRLPSGADKLRSRSNGGSKRELPAPKDVPGVQIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPEKEPLDWSTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSSRPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRYPMRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQAYDPNAAGHGYKGSGDDKRNRDDRGGRISKNEEGGGSGRRWDLEGSEKDESPRETARMLNRDLDRERAVAEAKMWGENWREKRRQNVQGSFDASNA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0046 461 PANTHER OS07G0668900 PROTEIN 3 370 - -
Dere03g0046 461 MobiDBLite consensus disorder prediction 370 461 - -
Dere03g0046 461 FunFam Serine/threonine-protein kinase PBS1 59 161 - -
Dere03g0046 461 SUPERFAMILY Protein kinase-like (PK-like) 69 357 IPR011009 -
Dere03g0046 461 MobiDBLite consensus disorder prediction 1 61 - -
Dere03g0046 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Dere03g0046 461 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Dere03g0046 461 Pfam Protein kinase domain 88 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0046 461 CDD STKc_IRAK 91 359 - -
Dere03g0046 461 FunFam Serine/threonine-protein kinase PBS1 162 376 - -
Dere03g0046 461 Gene3D Transferase(Phosphotransferase) domain 1 162 374 - -
Dere03g0046 461 Gene3D Phosphorylase Kinase; domain 1 53 161 - -
Dere03g0046 461 MobiDBLite consensus disorder prediction 7 21 - -
Dere03g0046 461 MobiDBLite consensus disorder prediction 377 452 - -
Dere03g0046 461 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0046 Dere-ChrDere03 3822964 3827413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0046 1 449 Glycoside Hydrolase AT3G07070 56.209 3.62e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dere03g0046 Pkinase 3.1e-45 CL0016