Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0025 ATGTGTACATTGGTTTATTTTAGTGAAGGTGTTGTGGCTGATTTTACGGTCGAGATTTCTTTCTTTCTATTCGACGGTCAATATAAACTCTGCTTTCCTCATCTCACGGGTTTCGATGTTTCGCTTTCGGAGCGTGGACCCCACTTAGTACTGGACTACTGGCTACTCAGAAAGGCGGGAACCCAGTTTTGTCGCAGGGCGAAGAAAAGATATGGATTTCCGGGTCTCCTGCTAGCTGCTGATTTGAGTTTGCAGATGGGTTCGGCATCTGATAAATGCCATGCTTTCTCTTCCTGCGTGGCGTCTGAGATTTGTGGCTTTAGACGCGCTCTAATGGTTAAGAAGAGATATAGTCCCTCTTATTATACAAAGGAGTTGTTTACTTTGCTTTTGCTGTTCTTATTGAGCTTGCACCACACCACTGTTGAGTGCCAGGGAAGGTTGAGTAAGCACAACTCTTCAGAATCAGAGGCAGTGGCTCCATCTAGGCCTTCACAGTATAAGGAAGACCTCCGCAAGATCATCATTAGCGTTGTTTTAGGAGCAGTAACTGGTTTAGTTGGCTCCGTTTTGTTTGCGCTTATAGTTCGTTGCTTTGTTCAATATTTGAATCGGACTCCAATTCTCAAGGGCCCTGTCATATTTTCCCCAAGAATTGCTCCCAAGACACTCCAATCAGCTTTGGCAAAAGAAAACCATTTACTTGGTTCAAGCCTCAACGGCAAATGTTACAGAACAGTGCTTGACAATGGGCTCACAATTGCAGTGAAGAGGCTAACCCCCTTTGAAAGTGGTTCGCCAGAGACTAGGAAAAAAAGGGTAAAGAGAGAGATACAGAAGGAGCTGGAAGTGCTTGCCAGCCTAAGACATCGGAATTTGATGAGCTTGCGGGCCTATGTTCGGGAGGCTGACAGATTTTCCTTGGTTTATGATTATGTAGCCAAGGGGAGCCTTGCGGATGCAATGAACAGAGTTAAGGAAAATGAGCTGCAGCTTGGTTGGGAGGTTCGGCTAAGGATTGCAATTGGGGTGGTTAAGGGACTTCAGTATCTTCACTTTACTTGTGTACCTCAAATTCTGCACTACAACTTGAAGCCCACCAATGTGATGTTGGATGCAGAGTTTGAACCCAGGTTGGCAGATTATGGATTGCTTAAGCTTCTGCCCAACTTGGATAGACCCACATCTCCTTACACTTCTCCTGAATGTTTTCATAGTTGCAGGTACAGTGATAAAAGTGACATATTCAGTTTTGGGATGCTATTGGGTGTATTATTAACCGGTAGGGACCCAGGGGATGCATTCTTTGGAGAAGCAGTGAGTGGGGGAAGCATGGGATGTTGGCTACGACAGTTGCAGCAAGCAGGAGATGCAAGGGAAGCCCTAGATAAGAGTATTATGGGGGAAGAAGGGGACGAAGACGATATGCTCATGGCTGTCAGAGTCGCTGCTGCTTGCCTTTCCGATGTGCCTGCAGACAGGCCTTCCAGTGATGAGCTTGTTCACATGCTAACGCAACTCCACAGTTTTTGA 1533 0.4605 MCTLVYFSEGVVADFTVEISFFLFDGQYKLCFPHLTGFDVSLSERGPHLVLDYWLLRKAGTQFCRRAKKRYGFPGLLLAADLSLQMGSASDKCHAFSSCVASEICGFRRALMVKKRYSPSYYTKELFTLLLLFLLSLHHTTVECQGRLSKHNSSESEAVAPSRPSQYKEDLRKIIISVVLGAVTGLVGSVLFALIVRCFVQYLNRTPILKGPVIFSPRIAPKTLQSALAKENHLLGSSLNGKCYRTVLDNGLTIAVKRLTPFESGSPETRKKRVKREIQKELEVLASLRHRNLMSLRAYVREADRFSLVYDYVAKGSLADAMNRVKENELQLGWEVRLRIAIGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLADYGLLKLLPNLDRPTSPYTSPECFHSCRYSDKSDIFSFGMLLGVLLTGRDPGDAFFGEAVSGGSMGCWLRQLQQAGDAREALDKSIMGEEGDEDDMLMAVRVAAACLSDVPADRPSSDELVHMLTQLHSF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0025 510 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 313 509 - -
Dere03g0025 510 Gene3D Transferase(Phosphotransferase) domain 1 313 509 - -
Dere03g0025 510 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 144 506 - -
Dere03g0025 510 Pfam Protein kinase domain 231 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0025 510 Coils Coil 271 291 - -
Dere03g0025 510 Gene3D Phosphorylase Kinase; domain 1 218 312 - -
Dere03g0025 510 SUPERFAMILY Protein kinase-like (PK-like) 232 504 IPR011009 -
Dere03g0025 510 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 221 312 - -
Dere03g0025 510 ProSiteProfiles Protein kinase domain profile. 229 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0025 Dere-ChrDere03 3662692 3666085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0025 175 507 Receptor kinase-like Gene Family AT2G31880 32.486 1.13e-57 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Dere03g0025 Pkinase 5.3e-30 CL0016