Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0022 ATGGCTTTGGAGCAGCAATTATCGCTGGGTCCGAATCCGAAACCCGTTGACGGCCAAACTGACGGAACCACTAACGGCGTCGATGCCCGGCCGCCGTCCACCGACGGCGGAGAGGATGGTATCAAAGCGCCGAGGCTGCCTCGTTGGACAAGACAGGAGATTCTGGTTCTCATACATGGGAAGAGAGACGCAGAGAACCAAATTCGAGGAAGCCGCAGTGCGGGGTTGCCCTTCGGGACGGGTCAGCTGGAGCCGAAATGGGCTTCCGTCTCATCGTACTGCAAAAGGCATGGAGTGAATAGAGGACCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAAAGAATGGGAATCTCAGATAAGGGACGAAACGGAATCGTTTTGGGTGATGAGAAACGATTTAAGGAGAGAGAGGAAACTGCCTGGATTTTTCGACAAGGAGGTCTACGATATTCTGGATTCGGGATCGCAGGCGCCGGCGTTAGCTTTAGCTCTGGCACCGGCTCCAGCAACAGGAACGGGTTCGTTGGAAAAGGGGAAGGACAGCAGGGGAGTGGCAGCGGAGGAAGCTGAGGCTGATACAGAGCCTCACTTGTACGATAGTCGGAGCGCGGCCGGGGAGGATGGCTTGTTCTCTGATTTCGAACAGGAAGAGGCAGGTGTGAGTCCAGAGAAGGAGGCGGCGAGGAAGGATGGTCTAGCGCATACCACGCCTGTCCCTGCTCCTATTCCAATCTCAGAGAAGCAATATCAACCACTTCTGCGTGGCTGTCAAGGTGAAGGAAATGCTCAAGGAGGGAACAATGAGAAACACCGAGGCTCAAATCCTGAAATGGGTTCTACGTCTCAAGGAGGACGGAAGAGGAAGCGGTTTGCAACGGATGATGAGGAGGAAATTTTGCAAAATCAATTGATCGATGTGTTGGAAAGAAATGGGAAGATGCTAAGCGCCCAGCTCGAAGCTCAGAATGTAAATTTCCAGTTGGATCGGGAGCAGCGGAAAGACCACGCTGGTAACTTAGTTGCTGTTCTTGATAAGCTTGCAGATGCTTTATGCAGAATTGCTGATAAATTGTAG 1098 0.5255 MALEQQLSLGPNPKPVDGQTDGTTNGVDARPPSTDGGEDGIKAPRLPRWTRQEILVLIHGKRDAENQIRGSRSAGLPFGTGQLEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIRDETESFWVMRNDLRRERKLPGFFDKEVYDILDSGSQAPALALALAPAPATGTGSLEKGKDSRGVAAEEAEADTEPHLYDSRSAAGEDGLFSDFEQEEAGVSPEKEAARKDGLAHTTPVPAPIPISEKQYQPLLRGCQGEGNAQGGNNEKHRGSNPEMGSTSQGGRKRKRFATDDEEEILQNQLIDVLERNGKMLSAQLEAQNVNFQLDREQRKDHAGNLVAVLDKLADALCRIADKL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0022 365 MobiDBLite consensus disorder prediction 268 289 - -
Dere03g0022 365 Gene3D - 49 119 - -
Dere03g0022 365 ProSiteProfiles Myb-like domain profile. 48 114 IPR001005 -
Dere03g0022 365 MobiDBLite consensus disorder prediction 263 302 - -
Dere03g0022 365 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 23 365 - -
Dere03g0022 365 MobiDBLite consensus disorder prediction 188 209 - -
Dere03g0022 365 MobiDBLite consensus disorder prediction 176 251 - -
Dere03g0022 365 MobiDBLite consensus disorder prediction 225 239 - -
Dere03g0022 365 MobiDBLite consensus disorder prediction 1 46 - -
Dere03g0022 365 Pfam Myb/SANT-like DNA-binding domain 48 137 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0022 Dere-ChrDere03 3644555 3647191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0022 21 205 Trihelix Transcription Factor Family AT3G25990 26.396 1.51e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere03g0022 Myb_DNA-bind_4 8.4e-12 CL0123