LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere03g0012	ATGGAAAAGTCCAAAGAGGCGCCGCCGGAAAAGGAAAACAAACTGAAAGATCGAAAGGTGTCGTGGGCAAAGCTCCGCCGTGTAGACTCCCTCAATTTGGAAGCCGGAAGAGTTTCTGCCTCTCAAACGCACTCCTCCAAGTTGAGTTGGAAAACGACGCTCAGTTTAGCATTTCAAAGCATAGGGATCGTATATGGGGATATCGGTACGTCTCCACTTTATGTGTACGCCAGTACTTTCACCAAGGGTATTGGCAACAACGATGACATTCTCGGCGTCTTGTCTCTCATCATCTATACTCTGGTACTCATACCCATGCTTAAGTATGTCTTCATCGTCCTATGGGCTAACGATAATGGTAACGGTGGAGCATTTGCACTCTATTCCTTGATATGTCGGCATGCAAAAGTGAGTCTGATTCCAAATCAACAACCAGAGGACAGGGAGCTTTCAAACTATAGACTGGAAGAACCATCCAACCAGTTGAAGCGAGTACAAAAAATAAAAAATAAGATGGAAAATAGTAAATTTGTGCGGATTTTGCTTTTACTAGTAACCATTATGGGAACTTCGATGGTAATAGGAGACGGGATTCTTACCCCATCAATTTCAGTTCTCTCTGCGGTGAGCGGGATCAGTTCATCATTAGGTCAAGATGCTGTTGTGGGGATTACTGTAGCGATCTTAGTCATCCTTTTCTCTGTCCAGCGCTTTGGTACTGATAAAGTGGGATTTTCATTCGCTCCCATTATCATAGTGTGGTTTTCATTCATCGGTGGAATCGGTCTTTATAATTTATTCAAATATGACGTTGGAGTATTGCGTGCTTTTAATCCAAAATATATAGTTGATTACTTCAGGAGGAATGGTAAGCAAGGCTGGATATCACTTGGTGGAGTCTTTCTATGTATAACAGGATCTGAGGCCATGTTTGCTGATTTGGGTCACTTCAGCGTACGAGCAATTCAAATTAGCTTCTCTTGCGTTACATTTCCTGCATTAATAGCTGCATATAGTGGGCAAGCAGCTTATCTACGAAAGTTCCCAGAGAAAGTGTCCAATACTTTCTTTGAGAGTATACCAGATTCCTTATATTGGCCAACGTTTGTCGTAGCTGTAGCTGCTGCAATCATAGCGAGTCAAGCAATGATTTCGGGAGCATTTTCCATTATAGCACAGGCACTAAATCTAGCTTGTTTCCCAAGGGTTAAGGTTGTGCATACTTCCGCCAAGCACGGTGGTCAGGTGTATATTCCCGAGGTCAACTACATGTTCATGGTTGCATGTGTTATAGTCAGTGTTGCCTTCAGGACCACGGAAAAAATTAGTCATGCTTATGGGATTGCTGTAGTTTGTGACATGATGATAACAACATCCCTGGTTTCGCTTATTATGCTAATTATATGGAAGACAAGCATCTGGTGGATTGTTCTCTTCTTTTTTGCATTCGGTTGCACGGAGGCACTATATTTTTCATCTGTATTATACAAATTCACGCAAGGAGGGTTTCTTCCACTTGTATCTGCTCTCTTCTTGACCATGGTGATGGGGATCTGGCATTATGTGCACAAGGAAAGATACATGTTTGAGCTCAAAAACAAGGTTTCCACAGAGTATCTAAGAGAAATGGCGAGCAGTTCAAATATAAACCGCGTGCCTGGAATTGGACTTCTATATTCTGAGCTAGTGCAGGGCATTCCTCCAATATTCCCCCACTTCATTGCCAACGTACCATCCATCCACTCGGTGGTTGTATTTGTTTCAATTAAGTCGATTCCTGTGAGCAGAGTTGCACTGGAAGAAAGATACTTGTTTCGGCAGGTGGAACCGAGAGAGCAGCGGATGTTCCGGTGTGTTGTGAGGTACGGGTACAATGATGCGATTGAGGAGCCAGAGGAGTTTGAGAGACAGCTAATACAACATTTGAAGGAATTCATTGGACAAGAAGAGCTGATGATGGGTGTGGGCGAGGGTGAGGGTGAAGGAAGCACAGAACAAGCTGGTGCTGTGACGGAGACAGCGAGTGAGCGGGAGATGGCAGTGGGTACAGAGGGAAAAGGAAGGGGCTCTGCTCACAGAATAATCCCAGAGCTAAGCCAAGGAATATCCCGTGCCTCATCAGATTCCGTGAGCAACAACTTCTCTGCCCCGCCCATCCAGGGAGTGGACGAGGAGATCAAATTTGTGGAGAAGGCAATGGAGAAGGGCGTGGTGTATTTGTTGGGGGAAGCAGAGGTTGTGGCCAAGCCTAATTCGTCCCTCCTCAACAAGATCGTTGTCAACTATGCCTATAGCTTCTTGAGAAAGAACTTTCGACAAGGGGACAAACTCATGGCAATTCCTCGCCACAGACTTCTCAAGGTCGGAATGACCTACGAAATATGA	2385	0.447	MEKSKEAPPEKENKLKDRKVSWAKLRRVDSLNLEAGRVSASQTHSSKLSWKTTLSLAFQSIGIVYGDIGTSPLYVYASTFTKGIGNNDDILGVLSLIIYTLVLIPMLKYVFIVLWANDNGNGGAFALYSLICRHAKVSLIPNQQPEDRELSNYRLEEPSNQLKRVQKIKNKMENSKFVRILLLLVTIMGTSMVIGDGILTPSISVLSAVSGISSSLGQDAVVGITVAILVILFSVQRFGTDKVGFSFAPIIIVWFSFIGGIGLYNLFKYDVGVLRAFNPKYIVDYFRRNGKQGWISLGGVFLCITGSEAMFADLGHFSVRAIQISFSCVTFPALIAAYSGQAAYLRKFPEKVSNTFFESIPDSLYWPTFVVAVAAAIIASQAMISGAFSIIAQALNLACFPRVKVVHTSAKHGGQVYIPEVNYMFMVACVIVSVAFRTTEKISHAYGIAVVCDMMITTSLVSLIMLIIWKTSIWWIVLFFFAFGCTEALYFSSVLYKFTQGGFLPLVSALFLTMVMGIWHYVHKERYMFELKNKVSTEYLREMASSSNINRVPGIGLLYSELVQGIPPIFPHFIANVPSIHSVVVFVSIKSIPVSRVALEERYLFRQVEPREQRMFRCVVRYGYNDAIEEPEEFERQLIQHLKEFIGQEELMMGVGEGEGEGSTEQAGAVTETASEREMAVGTEGKGRGSAHRIIPELSQGISRASSDSVSNNFSAPPIQGVDEEIKFVEKAMEKGVVYLLGEAEVVAKPNSSLLNKIVVNYAYSFLRKNFRQGDKLMAIPRHRLLKVGMTYEI	794

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere03g0012	794	MobiDBLite	consensus disorder prediction	671	690	-	-
	Dere03g0012	794	Pfam	K+ potassium transporter	57	626	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere03g0012	794	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	43	793	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere03g0012	794	NCBIfam	potassium uptake protein	56	794	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere03g0012	Dere-ChrDere03	3472154	3475988	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere03g0012	12	794	Inorganic Solute Cotransporters	AT4G13420	63.091	0.0	1026