Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0002 ATGTCGCTACGTGCCTCTGAACCCGCAAATTCTGAATATGAAAGTGCTTCAAACGAAGAGGAAGAAGCTTCAGAAGAAGAGGCTTCAAACGAAGAAGAGGATGTGCGAAGGGATTTAGCGAAATCACCGCTCTCTTTGCCTGCTGAGAAACAGAGAGACGTTGTTCCAATGGCTGTGACACGTGAATCTGAAGAGGAAGGCTCAACACAAGGAGAAGTGGAGCAGCAAATGCTGCCATCCCCTGCACAGAATAAGCGTAAGTCTCGACCTTCAGTTATGCCAGTCAGAGCAGCAAGAAAGAGGCGCACAGATGCTGATAGGCGTGAACAGATCCCAGTGGCAGAGAATGAGAATAATGTGAAGAAACGTTTTGAAAGGCTGTGGAGTGAGGAAGACGAAATTAGAATGCTCAAGGGGTTGCTTGAGTACACGCCAAGGAATAAAGCAGATATGAAAGTCTTTTACAATGTTATTAAAGGCTCGCTCCGTATTCAGGTTTCCCAATCGCAATTAGTGAAGAAGATTTGGAAATTAAAAAAGAAGTACACAAACAAAGCAAGGACAGGTAAACATGGTGCCGACCCAAAGTTTACAAATCCGCATGAAGAGAAAATATTTAAATTGTCTAAGAAGATGTGGGCCAAAAGTGCAGAATCATCACGTGAAGTAATTGGGTCTGAGCAAAGTTTACGTTCATGTGTTAGGGGATTTGAATTGATTGAAGCATCCAAGAAGGCAGAGTTGGAGGACCAGCGGAAGACATTGGAAACGACTGAATTGGAGCTATATGTGGAGCGAGCAAAGCTTGAAGCAAAACTTGCAGAATTAGATAGTAAGCTAGCAGAATTAAGTAGGAAGCGAACTCAACTAGCGGTAGAAGAGCGTATATTGGTATTAGAGGCATACAAGTCATCAACCAATTAG 924 0.4329 MSLRASEPANSEYESASNEEEEASEEEASNEEEDVRRDLAKSPLSLPAEKQRDVVPMAVTRESEEEGSTQGEVEQQMLPSPAQNKRKSRPSVMPVRAARKRRTDADRREQIPVAENENNVKKRFERLWSEEDEIRMLKGLLEYTPRNKADMKVFYNVIKGSLRIQVSQSQLVKKIWKLKKKYTNKARTGKHGADPKFTNPHEEKIFKLSKKMWAKSAESSREVIGSEQSLRSCVRGFELIEASKKAELEDQRKTLETTELELYVERAKLEAKLAELDSKLAELSRKRTQLAVEERILVLEAYKSSTN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0002 307 Coils Coil 13 38 - -
Dere03g0002 307 MobiDBLite consensus disorder prediction 70 87 - -
Dere03g0002 307 MobiDBLite consensus disorder prediction 14 32 - -
Dere03g0002 307 MobiDBLite consensus disorder prediction 1 107 - -
Dere03g0002 307 PANTHER BNAANNG10740D PROTEIN-RELATED 8 269 IPR007592 GO:0006355
Dere03g0002 307 Coils Coil 266 293 - -
Dere03g0002 307 Coils Coil 241 261 - -
Dere03g0002 307 Pfam Protein of unknown function, DUF573 124 213 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0002 Dere-ChrDere03 3205882 3206805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0002 85 214 GeBP Transcription Factor Family AT1G11510 34.815 1.77e-19 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Dere03g0002 DUF573 9.2e-28 CL0123