Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3378 ATGGCGGGGTCGTGTTTCCTTCCACGTCGGCTGTGGAGGTGGAAGAAGAAATCATTATTTCCGGTGGCTCCTTCTTCGTCGTCCAAGAGGCAGTTAGATTGTGAGGTCGAGAATCTGGAAAGGAAGAGGTTTGATAGCTTGGAATCATGGTCCATGATATTGGAGTCTGATAATGTGGAGACATGGGAGGCCTCGAAGGAGGATCAGGAAGAATGGACCGCCGACCTTTCCCAGCTTTTCATCGGAAACAAGTTCGCTTCCGGTGCTCACAGTCGGATTTACCGTGGGATTTACAAGCAGAGGGCCGTGGCTGTAAAAATGGTTAGAATTCCAACACAGGACGTGGAAAAAAGAACTTTACTTGAGCAGCAATTTAAATCTGAAGTTGATTTACTTTCACGTCTCTTTCATCCAAATATAGTGCAGTTTATTGCAGCTTGTAAAAAACCGCCAGTGTACTGTATCATTACAGAGTACATGTCACAAGGAACTCTGAGGATGTATCTGAACAAGAAAGAGCCATACTCTCTTTCAACAGAAACTATACTAAGGTTAGCTCTTGACATATCTAGGGGTATGGAGTACCTTCATTCGCAAGGTGTGATTCACAGAGACCTTAAGTCAAATAACTTGCTTCTAAACGATGAGATGAGGGTTAAGGTGGCAGATTTCGGCACATCGTGTCTTGAGACACGATGCCGGGAAACCAAAGGAAACATGGGGACATATCGTTGGATGGCACCGGAGATGATCAAGGAAAAACCCTATACTCGGAAGGTTGATGTGTATAGTTTTGGAATTGTGCTTTGGGAGCTCACAACTGCATTACTTCCTTTCCAAGGAATGACCCCTGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAACGAAAGGCCTCCGCTGCCGGAAAGTTGTCAGCCGGCGCTTGCACATCTGATAAAGCGTTGCTGGGCAGCAAATCCTTCAAAGCGCCCAGATTTCTGTGACATTGTGAGTGCTCTGGAGAAGCATGATGAGTGTGTCAAGCAAGGCCTTCCCCTAACTCATCATTCAGGCTTGGTCACTGAAAATGTCATTATTCAACGCTTGAAAGGTTGTGTCCCCATGACTTCCTCTATACCAGTACATGGCTGA 1131 0.4607 MAGSCFLPRRLWRWKKKSLFPVAPSSSSKRQLDCEVENLERKRFDSLESWSMILESDNVETWEASKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQDVEKRTLLEQQFKSEVDLLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPESCQPALAHLIKRCWAANPSKRPDFCDIVSALEKHDECVKQGLPLTHHSGLVTENVIIQRLKGCVPMTSSIPVHG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3378 376 ProSiteProfiles Protein kinase domain profile. 79 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3378 376 Gene3D Transferase(Phosphotransferase) domain 1 162 354 - -
Dere02g3378 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Dere02g3378 376 PRINTS Tyrosine kinase catalytic domain signature 241 251 IPR001245 GO:0004672|GO:0006468
Dere02g3378 376 PRINTS Tyrosine kinase catalytic domain signature 260 282 IPR001245 GO:0004672|GO:0006468
Dere02g3378 376 PRINTS Tyrosine kinase catalytic domain signature 304 326 IPR001245 GO:0004672|GO:0006468
Dere02g3378 376 PRINTS Tyrosine kinase catalytic domain signature 195 213 IPR001245 GO:0004672|GO:0006468
Dere02g3378 376 PRINTS Tyrosine kinase catalytic domain signature 157 170 IPR001245 GO:0004672|GO:0006468
Dere02g3378 376 Gene3D Phosphorylase Kinase; domain 1 68 161 - -
Dere02g3378 376 FunFam Serine/threonine-protein kinase isoform 1 69 161 - -
Dere02g3378 376 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 72 335 - -
Dere02g3378 376 FunFam serine/threonine-protein kinase HT1 162 355 - -
Dere02g3378 376 CDD STKc_MAP3K-like 86 333 - -
Dere02g3378 376 SUPERFAMILY Protein kinase-like (PK-like) 54 333 IPR011009 -
Dere02g3378 376 Pfam Protein tyrosine and serine/threonine kinase 81 333 IPR001245 GO:0004672|GO:0006468
Dere02g3378 376 SMART serkin_6 79 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3378 Dere-ChrDere02 42902764 42907518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3378 1 366 MAP Kinase Kinase Kinase AT1G62400 82.400 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dere02g3378 PK_Tyr_Ser-Thr 6.1e-67 CL0016