Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3358 ATGGTAATCTCTACCTTCATTTTAATAATACCTCTGGCACTCTTTGGTGCCAACATGTCAGCTTCTAGTGCCTTGATGGCAGAATCCTCCGCAAGAGAAGAAGCAGAGGCTTTGATTCAGAGTGGGTGGTGGTCATGGTGGTTTGAGTCGGACCAAAACATCTCAAACTATTGCAGATGGCCTAGCATTGTGTGCAATAATGCCGGAAGCATCACAAAGATTTCAAGCCCAGAAAATATGACTGACTCATACCCATGGTTTTCTGATATGAATTTCTCGGCCTTCCATAATTTAGTCAGTATAGACTTCAGTGAAATGGGGCTTTCAGGAAGCATCGTTCTTGATCCAGGTGCTCTTATGAAGCTCACCCATCTCAACTTATCCCATAATAATCTTGAAGGTGAGCTACCTACCACTATAGCAGATCTCTCTCATCTTGAGATGCTTCACATTTCTAGTAACAGTCTAAGTGGTGCAATTCCTCCTCAACTTGGAAATTTGAGAGAACTTGTCTCACTCAACTTGAGTTTCAACAAGTTCAATGGAAGCATTCCTTCAAGCCTGGGAGATCTACCAAGCCTCACTCATCTAGACTTGTCCCATAATGGTCTTGAAGGTGAGCTACCTACCACTATAGCAAATCTCTCTCATCTTGAGATGCTCCACATTTCTATTAACAGTCTAAGTGGTGCAATTCCTCCTCAACTTGGAAATTTGAGAGAAATTGTCTCACTCAACTTGAGTTTCAACAAGTTCAATGGGAGCATTCCTTCAAGCCTGGGAGATCTACCAAGCCTCACTCATCTAGACTTGTCCCATAATGGTCTTGAAGGTGAGCTACCTACCACTATATCAAATCTCTCTCATCTTGATATGCTTCACATTTCTAATAACAGTTTAAGTGTTGCAATTCCTCCTCAACTTGGAAATTTGAGGGAACTTGTCTCACTCAACTTGAGTTTCAACAAGTTCAATGGAAGCATTCCCTCAAGCTTGGGATATCTCTCAAGCCTCACTCATCTAGACTTGTCCTCTAATGCACTGACAGGTGAGCTACCTAGCACACTTGGAAATCTCACTCGGCTCATCATGCTTGATACTTCTTCTAATCATTTGAGTGGTTCAATTCCCTTACAAATTGGGTACTTTCTCACCAATCTGGAATTTCTGGACTTGAGTGCAAACAATCTCCGAGGTCCTATTCCTTTGTCTTTGTATGAATTAACGAATTTGAAATACCTTGTCCTTAATTCAAATCAAATAAGTGGAGTCTTACACCCGAGGATCAAACAATTAGAAGCTTTGATTATTCTAGACCTATCTCATAACATGATATCTGGTAGAGTTCCAATTGAGCTTTTTCAACTAATTATTGACCTAGAGGTTGTTGATCTTTCCACAAACCAACTATCTGGCTCAATACCACAAGAAGGAAGGTTGTGCTGCATCTACAGAACTCTAAACCTGTCCCACAACAAGCTGAATGGAGCTATTCCTTCGCAGTTAGTTTACTCTGGCATGTCAAACATGGATCTTAGCTACAATAATCTTAGTGGCCATATACCTTTGGAACTTGGCTTGCTATCTAGCACAAATTTATCATACAATTCCCTCAGTGGTTATATCCCGGAAGAAATATATTGTCAATTTTCCGAAGATAGTTTCATTGGTAATAAGGGGTTAATTGGTCCAACAAATGCTTGTTCTTCTAGATCTTTGACAATCACTAGATCCAGTACCAATATATTGTTAAACTCAAAATGGGAAGCATTTGTCTCAGACTTTGGCACAGCAAGACTCCTTATTCCTGATTCCTCCAATGAAACCAATCTTGTAGGAACTTATGGATATATGGCTCCTGAACTTGCCTATACATTAACTGTGACAGTTAAATGTGATGTTTATAGTTTTGGAGTGGTGGCATTAGAAATAATCATGGGGATGCATCCAAGAGAGCTCATTTCTTTTCTATCGAAGCCATCTACTGAGTTCAAAAGGATGGCATTGAAAGACATCCTAGACTCACGCTTGAATATTCCCTCTTCTCATAGAGATGCTCAAGATGTGGTTATTGTGGTAACACTTGCAATAGCATGTCTTCGTTCAAAGCCCAAGTCTCGTCCTTCAATGCAACAAGTAGCTAAGGAACTATTGGTTTCCAGGCCACCACTATCGATGCCTTTTGATAACATTTCTTTCGGCCATTTAATGAATCAGGAGACATATCTTGTACATGAATTATAA 2244 0.4015 MVISTFILIIPLALFGANMSASSALMAESSAREEAEALIQSGWWSWWFESDQNISNYCRWPSIVCNNAGSITKISSPENMTDSYPWFSDMNFSAFHNLVSIDFSEMGLSGSIVLDPGALMKLTHLNLSHNNLEGELPTTIADLSHLEMLHISSNSLSGAIPPQLGNLRELVSLNLSFNKFNGSIPSSLGDLPSLTHLDLSHNGLEGELPTTIANLSHLEMLHISINSLSGAIPPQLGNLREIVSLNLSFNKFNGSIPSSLGDLPSLTHLDLSHNGLEGELPTTISNLSHLDMLHISNNSLSVAIPPQLGNLRELVSLNLSFNKFNGSIPSSLGYLSSLTHLDLSSNALTGELPSTLGNLTRLIMLDTSSNHLSGSIPLQIGYFLTNLEFLDLSANNLRGPIPLSLYELTNLKYLVLNSNQISGVLHPRIKQLEALIILDLSHNMISGRVPIELFQLIIDLEVVDLSTNQLSGSIPQEGRLCCIYRTLNLSHNKLNGAIPSQLVYSGMSNMDLSYNNLSGHIPLELGLLSSTNLSYNSLSGYIPEEIYCQFSEDSFIGNKGLIGPTNACSSRSLTITRSSTNILLNSKWEAFVSDFGTARLLIPDSSNETNLVGTYGYMAPELAYTLTVTVKCDVYSFGVVALEIIMGMHPRELISFLSKPSTEFKRMALKDILDSRLNIPSSHRDAQDVVIVVTLAIACLRSKPKSRPSMQQVAKELLVSRPPLSMPFDNISFGHLMNQETYLVHEL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3358 747 ProSiteProfiles Protein kinase domain profile. 350 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3358 747 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 88 299 - -
Dere02g3358 747 Pfam Protein kinase domain 580 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3358 747 SMART LRR_sd22_2 432 462 - -
Dere02g3358 747 SMART LRR_sd22_2 119 145 - -
Dere02g3358 747 SMART LRR_sd22_2 191 217 - -
Dere02g3358 747 SMART LRR_sd22_2 263 289 - -
Dere02g3358 747 SMART LRR_sd22_2 335 361 - -
Dere02g3358 747 SMART LRR_sd22_2 408 426 - -
Dere02g3358 747 SMART LRR_sd22_2 384 405 - -
Dere02g3358 747 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 260 476 - -
Dere02g3358 747 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 300 572 - -
Dere02g3358 747 SMART serkin_6 484 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3358 747 Gene3D Ribonuclease Inhibitor 284 571 IPR032675 -
Dere02g3358 747 Gene3D Ribonuclease Inhibitor 184 283 IPR032675 -
Dere02g3358 747 Gene3D Ribonuclease Inhibitor 23 183 IPR032675 -
Dere02g3358 747 SUPERFAMILY Protein kinase-like (PK-like) 579 725 IPR011009 -
Dere02g3358 747 Pfam Leucine Rich repeat 120 135 IPR001611 GO:0005515
Dere02g3358 747 SUPERFAMILY L domain-like 326 546 - -
Dere02g3358 747 Gene3D Transferase(Phosphotransferase) domain 1 577 724 - -
Dere02g3358 747 Pfam Leucine rich repeat 144 204 IPR001611 GO:0005515
Dere02g3358 747 Pfam Leucine rich repeat 216 276 IPR001611 GO:0005515
Dere02g3358 747 Pfam Leucine rich repeat 312 372 IPR001611 GO:0005515
Dere02g3358 747 SMART LRR_typ_2 119 142 IPR003591 -
Dere02g3358 747 SMART LRR_typ_2 215 239 IPR003591 -
Dere02g3358 747 SMART LRR_typ_2 335 359 IPR003591 -
Dere02g3358 747 SMART LRR_typ_2 287 311 IPR003591 -
Dere02g3358 747 SMART LRR_typ_2 191 214 IPR003591 -
Dere02g3358 747 SMART LRR_typ_2 432 456 IPR003591 -
Dere02g3358 747 SMART LRR_typ_2 143 167 IPR003591 -
Dere02g3358 747 SMART LRR_typ_2 384 408 IPR003591 -
Dere02g3358 747 SMART LRR_typ_2 263 286 IPR003591 -
Dere02g3358 747 PRINTS Leucine-rich repeat signature 338 351 - -
Dere02g3358 747 PRINTS Leucine-rich repeat signature 384 397 - -
Dere02g3358 747 SUPERFAMILY RNI-like 92 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3358 Dere-ChrDere02 42627752 42630698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3358 45 593 Receptor kinase-like Gene Family AT2G25790 35.082 5.80e-76 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere02g3358 Pkinase 4.1e-15 CL0016