Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3332 ATGTCCTTCGAAGAGCCTCTTCCTCCGAAAAAGCCTTTGATCCTCTGCGATCATTCCTATGGAATAAGAGTTAAATCGCTTCAGGAGGCTAATGATATCGTGCCCAGCAACCTGCGGCCGAAAATCATGGTGAGCCATGTCATGTTTGTGCAAATGATTGACTATGTAGTTGACTTTCCTTCTACCATGGGGTACGCACTCAGAATGTCGGAGGATACTCCTGTTTTTGTGGAATGGGAGGAGCAGATTATATGCCAGGAGCGGGGGAATCGTGTAACTCACTTCTACTTGAAGGATGCATCAGGGCATTCGGTGCTTGCTGTCGTGGGCACTGAGAGGAGTATAAGGCATATGATGTATGTTGTCGCAGAGGAATTTTTGCAGGCATATGGGTCCAACGATATCGTTTCTCCGTGTAAATGGCGGGCAAGGAGAGAGGTTGTAGACTGGCTCACATGTTTGGTCTCGAGGAATGGTCAACAACATTTAGATAATTTGAATGCACAGATGAATGATTCAGCACAAGCTCTAGACCCTCTTGAAGCATTAACAGCTGGAATCAGTGCTAATAAAAATTCTATGCCTGACAAAATGGTTTCTAGGAAATTGAAATTTCAAAGTTCAGATATTGAATGGTCAGGCACATCCTGGTTTTGTGCTAAACAGCTTAAGCACTACTCAGGATTTTGTAGGAATGGAACAACCATATATGTTCATTCATTTGTATATATTATGGCTGAAGAAGAAATTCATTATCTTGGTTACTTAGAAGATATGTATGAGGATAAGAAGGGACAAAAAAAGGTCAAAGTAAGATGGTTTAACCATGGTCAGGAAGTTAAGCGTGTAATTCCACAGCTGACTCTGCAACCAGGAGAAGTTTTCATCACACCTCAGGTTCGAGTGATTAGTGCTGAGTGTGTCAATGGTCCTGCAATGGTTTTGAGTCCCAAGCATTATGAGAAATGTTTGACTGCTGTGCCACTTAACTCTTCAGCTGAGGTCCATGTGTGCTCAAGGCAGTTTAAGAACAATAAGCTTAAGCCTTTCTCTCTTTCTAAGCTGCGTGGGTATAGTAACCAACCTGTGCTTTCTTGTTTAACTAGTCCTATCCTCTCTAAGAGAATGGTCAAGCGTCAGAAATTACACACAGAAGATGATGAAGACTTCTTTCAAGATGATCCTTCAAGGCCTAGTAGTAAGAGGAATAGATGTTCTAAAGGGTATCAAGTACTTGAAAAGGGCACTTCCGGTCTGCAAAATGCTGCCTGTAAGAATCAGATGACAAAATGTGAATCAACATACCCGAGGTTAAAATTAAGACTATCAAGAAAAACAATGGGTATTAAGGTTATCGGTCCTAAGTCCCAGAGCCATCTGTCTTTCAAGGATGATGAAAAGATAGAGATTCTGTGTCAAGATAGTGGCATCAGAGGATGCTGGTTCAGGTGTAAAATCTTATATACATCCCAGAAGCAGCTGAAGGTCCAGTATGATGATGTACTGGATGCAGATGGACTAGGGAAGCTGGAGGAATGGGTCCCTGCATCTAGAGTGGCAGCATCTGATAAATTGGGTATTCGATGTTCTGGGCGCTTAACTGTTCGGCCATGCCCTACTGAAGATACTGCAGACCATACTTTTGAAATTGGAGAACAAGTGGATGCCTGGTGGAGTGACGGATGGTGGGAAGGTGTTATTATTGCAGTCAATGTTTGTGGAGTTCATACCTTGCAGGTTTATTCCCCTGGTGAAGGGAAGCTCCTTGTGCTTGAGAAGAAGAATGTCCGAATTTCACGAGACTGGGTTGGTGACAGGTGGGTTGATTTGCGGCGGAAGCCTGACATTTGCAGCATCTTATCTTCGAATTTTGCTTCTGGCATCAAGCCGTCAGCTCATTCCAATGAGGCAGATGGATCTGTGTCTGATTTTTCTGTAATGTTAGAGAGTAAAATTTTGCCAATTCCTAAAGCTGAAGTCCTTCAGAAGGATGAGCCTCAATTATCTGGTTTCAGTGCATCTGATGACCAGGAAAATACAAAGGGGCTGACATTGGGAAAGCCTCTCGATGTCATTGACGAAGACAAAGATAATAACTCTGGTGGTGCCATTGATGATGACTCTAACAAAGATGACAATAGTAATGACAGGGATAACGTCAGTGAAGAAAAATTGATGGTGGAGCAAAATTTTGATTCTGCAAAACTAAAACTTGATGCAGGAGAAGCAATAGAAGTTGCATGA 2244 0.4256 MSFEEPLPPKKPLILCDHSYGIRVKSLQEANDIVPSNLRPKIMVSHVMFVQMIDYVVDFPSTMGYALRMSEDTPVFVEWEEQIICQERGNRVTHFYLKDASGHSVLAVVGTERSIRHMMYVVAEEFLQAYGSNDIVSPCKWRARREVVDWLTCLVSRNGQQHLDNLNAQMNDSAQALDPLEALTAGISANKNSMPDKMVSRKLKFQSSDIEWSGTSWFCAKQLKHYSGFCRNGTTIYVHSFVYIMAEEEIHYLGYLEDMYEDKKGQKKVKVRWFNHGQEVKRVIPQLTLQPGEVFITPQVRVISAECVNGPAMVLSPKHYEKCLTAVPLNSSAEVHVCSRQFKNNKLKPFSLSKLRGYSNQPVLSCLTSPILSKRMVKRQKLHTEDDEDFFQDDPSRPSSKRNRCSKGYQVLEKGTSGLQNAACKNQMTKCESTYPRLKLRLSRKTMGIKVIGPKSQSHLSFKDDEKIEILCQDSGIRGCWFRCKILYTSQKQLKVQYDDVLDADGLGKLEEWVPASRVAASDKLGIRCSGRLTVRPCPTEDTADHTFEIGEQVDAWWSDGWWEGVIIAVNVCGVHTLQVYSPGEGKLLVLEKKNVRISRDWVGDRWVDLRRKPDICSILSSNFASGIKPSAHSNEADGSVSDFSVMLESKILPIPKAEVLQKDEPQLSGFSASDDQENTKGLTLGKPLDVIDEDKDNNSGGAIDDDSNKDDNSNDRDNVSEEKLMVEQNFDSAKLKLDAGEAIEVA 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3332 747 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 352 714 - -
Dere02g3332 747 MobiDBLite consensus disorder prediction 688 726 - -
Dere02g3332 747 CDD Tudor_Agenet_AtDUF_rpt1_3 462 539 - -
Dere02g3332 747 SMART agenet_At_2 546 604 IPR014002 -
Dere02g3332 747 Pfam BAH domain 235 347 IPR001025 GO:0003682
Dere02g3332 747 Pfam Agenet domain 466 539 IPR008395 -
Dere02g3332 747 Gene3D - 201 367 IPR043151 -
Dere02g3332 747 MobiDBLite consensus disorder prediction 383 405 - -
Dere02g3332 747 MobiDBLite consensus disorder prediction 668 726 - -
Dere02g3332 747 ProSiteProfiles BAH domain profile. 234 353 IPR001025 GO:0003682
Dere02g3332 747 MobiDBLite consensus disorder prediction 383 401 - -
Dere02g3332 747 SMART BAH_4 234 353 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3332 Dere-ChrDere02 41851449 41863115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3332 474 602 PHD Transcription Factor Family AT5G58610 29.323 5.62e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g3332 02 41851449 41863115 Dere02g3332 02 41851449 41863115 ECH