Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere02g3308 | ATGACGTCTCACGTGACCCTTGAAGCAACCTCCACCTGCCAAAACCTTCTTCTTCGTTCATTATTCCTTCTTGGCGTAGCAGCAATGGAACGTGGAGGCTTTCATGGGTACCGCAAGCTCCCCAGCACAACCTCTCCAGTTCTTAACACAATGACAGGGTTGAAGCTATCTTCAGTGTCGGAGACGATGAACATGAGGCAGCAGCTAGCAGCAGATAACAACCATGGCCACTCATCAGCAGGAGCAGATGACACCGATTGCACAGTGAGGGAGCAAGACAGGTTCATGCCGATCGCTAATGTGATCAGGATCATGCGCAAGATCCTACCGCCACATGCCAAGATCTCCGACGACGCGAAGGAGACGATCCAGGAGTGCGTGTCGGAGTATATCAGCTTCATCACCGGCGAGGCGAACGAGCGGTGCCAGAGGGAGCAGCGGAAGACGATCACCGCCGAGGACGTCCTCTGGGCGATGAGCAAGCTCGGGTTCGACGACTACATCGAGCCCTTGACCATGTACCTGCACCGGTACCGGGAGATGGAGGGCGACCGGGGCTCCATGCGAGGCGAGCCGCTGGGGAAGAGGACGGTGGAGCCGCCGTATGGGGCTGCGGCGTTGGGGGCCTTTGTCCCGCCGTTTCACATTGGGCATCCGAATGGATATTTCGGTGCAGCAGCAGCAGCAGCCATGGGAGGGTACATGAGGGAGCATGCACAGAGTAATGCAGGAGGAGGGCCGTCTCAAGCTGAACCAAATGGCCAATACAAGTGA | 774 | 0.5724 | MTSHVTLEATSTCQNLLLRSLFLLGVAAMERGGFHGYRKLPSTTSPVLNTMTGLKLSSVSETMNMRQQLAADNNHGHSSAGADDTDCTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYREMEGDRGSMRGEPLGKRTVEPPYGAAALGAFVPPFHIGHPNGYFGAAAAAAMGGYMREHAQSNAGGGPSQAEPNGQYK | 257 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere02g3308 | 257 | PRINTS | CCAAT-binding transcription factor subunit A signature | 161 | 179 | - | - | |
Dere02g3308 | 257 | PRINTS | CCAAT-binding transcription factor subunit A signature | 142 | 160 | - | - | |
Dere02g3308 | 257 | PRINTS | CCAAT-binding transcription factor subunit A signature | 123 | 141 | - | - | |
Dere02g3308 | 257 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 68 | 226 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Dere02g3308 | 257 | MobiDBLite | consensus disorder prediction | 242 | 257 | - | - | |
Dere02g3308 | 257 | SUPERFAMILY | Histone-fold | 92 | 191 | IPR009072 | GO:0046982 | |
Dere02g3308 | 257 | MobiDBLite | consensus disorder prediction | 238 | 257 | - | - | |
Dere02g3308 | 257 | FunFam | Nuclear transcription factor Y subunit B-6 | 84 | 199 | - | - | |
Dere02g3308 | 257 | Gene3D | Histone, subunit A | 83 | 198 | IPR009072 | GO:0046982 | |
Dere02g3308 | 257 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 95 | 159 | IPR003958 | - | |
Dere02g3308 | 257 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 126 | 142 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere02g3308 | Dere-ChrDere02 | 41526877 | 41529906 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere02g3308 | 29 | 222 | CCAAT-HAP3 Transcription Factor Family | AT5G47670 | 60.096 | 6.16e-76 | 228 |