Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3305 ATGAAATTCTTGCTAACTGAGCGTATAATGGGTGAACATTTGGGGATTTTGAAAGTCATCGTTGTGCAAGGCAAAAGATTAGTGATTAGGGATTTCAAGAGCAGCGATCCTTATGTTGTGGTCAAGCTGGGAAATCAGACAGCAAAGACCAAGGTGATTAATAGTTGCTTGAATCCTGTTTGGAATGAAGAGCTGAGTTTCACTCTGACAGAACCCTTGGGAGTTCTAAATTTGGAAGTATTTGATAAGGATCTTTTGAAGACTGATGACAAGATGGGAAATGCTCACCTTAATCTTCAACCATTAGTCTCTGCAGCTAGAATAAGAGACATTTTACGGGTTTCCTCCGGCGAGACAACAATAAGGAAGCTCGTACCAGACAGCGAAAACTGCCTTGTTCGTGAAAGCAGTATCAATTGTGTCAATGGTGAGTTGGTGCAGAATGTCTGGTTACGGCTTCGTGGAGTTGAATCTGGAGAGCTAGAATTGACAATCAAGTTGATCACTCCCATGGCTCACTCAGTATCATAG 531 0.42 MKFLLTERIMGEHLGILKVIVVQGKRLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFTLTEPLGVLNLEVFDKDLLKTDDKMGNAHLNLQPLVSAARIRDILRVSSGETTIRKLVPDSENCLVRESSINCVNGELVQNVWLRLRGVESGELELTIKLITPMAHSVS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3305 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 13 169 IPR044562 -
Dere02g3305 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 168 IPR035892 -
Dere02g3305 176 SMART C2_3c 16 111 IPR000008 -
Dere02g3305 176 Pfam C2 domain 15 109 IPR000008 -
Dere02g3305 176 CDD C2_ArfGAP 14 159 - -
Dere02g3305 176 PRINTS C2 domain signature 31 43 IPR000008 -
Dere02g3305 176 PRINTS C2 domain signature 55 68 IPR000008 -
Dere02g3305 176 PRINTS C2 domain signature 76 84 IPR000008 -
Dere02g3305 176 Gene3D C2 domain 13 174 IPR035892 -
Dere02g3305 176 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3305 Dere-ChrDere02 41467615 41469737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3305 10 168 C2H2 Transcription Factor Family AT4G05330 43.396 8.08e-38 130