Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3289 ATGTGCAGCAGCATCTTTGGCCCAATTATGGACAATAATGATCATCAAGGCGATCTCACTGACATATTCCGAGCAAGTAGAGGTGGTGGTGGTGGTGGCTCATATGGCACTTCTTCTTCTTCGACATCTGAATTAGCTCCTCATGGTCTCTCTTCTTCTTCTTCAGACAGCTGGCACCACCACCACCATCAGCATCATCAGCACCACCACATGAATTTCTCTTCAGTCATGGAAGATCCCATGAGAGTCTTCGGCGATCCCTTCTCCAACATGCGAGATCCCTTCCTTCACGACCTCGATTTGCCTCCTCCACCTTCTTCCTACTTCACTACTACTGCAACTAATAATTCTGCCATGGAAGAAGCATCGCCTGGTTTTGCTCCTTCAGTTGTTTTATCACAGAATCTTGTCGAAGATGAGATGAGAATTAGGCCTCCTCCTTGCAACACCAACACCACCCACACCAACAACATATTCTCAAACATGATTCAGATCTCTCCCAGTAGTATCAACGCCAAGCTTCCAGTTTCGCCCTGCGATTCTCCTCCAGTGAATATGGCTGCTGCTAATTCTTCGTCGTCGCCGTTGTCGCCGAGGGTAATTGAGCGGTCTTCTTCTGCTGTGGTTTCTGCAGGCAACATGAATATCACTGTGGACAACGCAGGAGTGCAGATCTCGTCTCCAAGGAATCCGGGTCTTAAGCGAAGGAAGAGCCAGGCAAAGAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACCAAGTAGTGGAGAGGTAGTTCCTTCTGATTTGTGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCTCCTTATCCAAGGGGTTACTATAGATGCAGCAGCTCGAAGGGTTGTTCTGCGAGGAAACAAGTAGAGAGGAGCAGGACAGACCCAAACATGTTGGTCATAACTTACACTTCAGAGCACAACCATCCATGGCCGACTCAAAGAAATGCTCTTGCAGGCTCAACAAGGTCTCAACCATCCAAGCACAATAATAATAATAATAATAACGATGCTGTCTCAAAGAATAATAACAATTCTGCAGAAGGCTTAAACCTCATGTCGTCGAAGCCAAAGGAAGAGGACCAGCAAGATCAGAGTAGCAGTGATGTCAGCAAGAGAGGAGGGAACTCTGTGAAGGAGGAGATGGAGATGGAAGAAGGAGAGAGGCATGATGAGCTTGAGAATATTGTTATGGAAGATAATAATAATAATAATAATAATAATAATGGAGAATTCAGTGATGGACTATCTTCTTACAAGCCATATATGGTGGAGTGTAATCAATCTGAGGACTTCTTTGCAGAATTGGGAGAGATTGAAGCTGACCCGCTGAATCTTTTGTTCACTCATCAAGGTTTCAATGAGCAGCAGCAGAGAGAATCCAAGGCTTTAGATCCTTTTCATCTCTTTGACTGGTCATCATCAGGAGATCACAACACCAACACCAACAACACCACCACCCCATATGATGAGCCAAAGAGAGGGTTATAA 1527 0.4565 MCSSIFGPIMDNNDHQGDLTDIFRASRGGGGGGSYGTSSSSTSELAPHGLSSSSSDSWHHHHHQHHQHHHMNFSSVMEDPMRVFGDPFSNMRDPFLHDLDLPPPPSSYFTTTATNNSAMEEASPGFAPSVVLSQNLVEDEMRIRPPPCNTNTTHTNNIFSNMIQISPSSINAKLPVSPCDSPPVNMAAANSSSSPLSPRVIERSSSAVVSAGNMNITVDNAGVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKHNNNNNNNDAVSKNNNNSAEGLNLMSSKPKEEDQQDQSSSDVSKRGGNSVKEEMEMEEGERHDELENIVMEDNNNNNNNNNGEFSDGLSSYKPYMVECNQSEDFFAELGEIEADPLNLLFTHQGFNEQQQRESKALDPFHLFDWSSSGDHNTNTNNTTTPYDEPKRGL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3289 508 Pfam WRKY DNA -binding domain 265 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g3289 508 MobiDBLite consensus disorder prediction 485 502 - -
Dere02g3289 508 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 145 460 IPR044810 GO:0003700
Dere02g3289 508 SMART WRKY_cls 263 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g3289 508 Gene3D WRKY domain 236 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g3289 508 MobiDBLite consensus disorder prediction 484 508 - -
Dere02g3289 508 MobiDBLite consensus disorder prediction 280 402 - -
Dere02g3289 508 MobiDBLite consensus disorder prediction 307 364 - -
Dere02g3289 508 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g3289 508 SUPERFAMILY WRKY DNA-binding domain 261 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g3289 508 MobiDBLite consensus disorder prediction 16 72 - -
Dere02g3289 508 MobiDBLite consensus disorder prediction 32 54 - -
Dere02g3289 508 FunFam probable WRKY transcription factor 14 236 317 - -
Dere02g3289 508 MobiDBLite consensus disorder prediction 386 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3289 Dere-ChrDere02 41215843 41218670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3289 1 462 WRKY Transcription Factor Family AT2G34830 41.438 5.57e-85 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere02g3289 WRKY 3e-25 CL0274