Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3288 ATGAAGTCTATGCAAGATAGGAAGGAAAGGCGATGGATTTTGGAAAGGAAGCTTGCTGATGCTGATGTTCCTGAGGAAGAGCAAATGGATATTCTGAAAACTTTTGAGAAAAATGAGACAGAATATATGCGCATTCAGAGGCATAAGATAGGAGTTGATGATTTTGAACTTTTGACCATCATAGGCAGGGGTGCTTTTGGGGAGGTAAGACTGTGCAGAGAAAAAGGTACTAGTAATGTGTATGCTATGAAGAAGCTGAAGAAATCTGAGATGCTCCGCAGAGGCCAGGTTGAACATGTTAGAGCTGAAAGGGATCTTCTTGCTAAGGTTAATAGTGCTTACATTGTGAAGCTGTACTGCTCCTTTCAAGATGACGAATTTTTATATCTTATAATGGAATTCCTTCCTGGAGGAGACATGATGACATTACTTATGCGCAAAGAAATCTTAACTGAGAATGAGGCTCGGTTTTATGTGGCAGAGGCTGTACTTGCTATTGAGTCTATTCACAAGCACAACTATATACACAGGGATATCAAGCCTGACAATTTACTGCTTGATCGAGATGGTCATTTGAAGCTTTCAGATTTTGGGTTGTGTAAACCATTGCACAGTAGTAATTTTCCAAATTTAAATGAGAATAAACTTGGGCCAGGAAGGAGCTATAAATCTTCTATGGATCGAAACAGTGATTGTGACCCACGACATGTTGCATCAATACGGACCCAGCAGGAACAGTTGCTACACTGGCAAAGGAACAGGCGTATGTTGGCTTATTCAACTGTAGGAACACCAGACTACATTGCCCCTGAGGTACTGCAGAAGGCAGGATATGGAATGGAGTGTGACTGGTGGTCTCTTGGTGCAATCATGTATGAGATGCTTGTGGGATATCCACCTTTTTACTCTGAAGATCCTATGTCAACTTGTAGGAAGATAGTAAATTGGAGAACCTATTTGAAGTTTCCTGATGGAGCAAAGCTGTCTCTTGAGGCTAAAGATCTCATTTGTAGGTTGTTATGTAATGTGGAGCAGAGGCTTGGGACTAAAGGAGCTCATGAAATTAAGGCGCATCCATGGTTCAAAAGTTTGCAATGGGATAGATTGTATCAGATGGAAGCTGCTTTTATTCCAGAGGTCAATGATGATTTGGACACTCAGAATTTTGATAAGTTTTCTGAGGCCGCAGCTCCTGAGCAAATACCACCAAGATCAGGACCATGGAAAAAGATGCTTTCTTCTACTGATGCAAATTTTGTCGGCTACACTTATAAGAACTTTGAGGTTGTCAATCAGCATAACATTTCTGACATCGCTCAACTGAGGAAAAAGACTACCCGGCCGAAGACACCATCTATCAAATCATTATTTGATACACCGGATCCTTCTGCTAAACCTGTTTTAGGGAGCTTTCTCAACATTTTACCGACCCACTCAGAAGTCTCAGAAAGTGCCGAGCCATCATCTCCATCTGCTACAAATGTACAGCGTCAACCCAAAGCTGTTCGATGA 1512 0.416 MKSMQDRKERRWILERKLADADVPEEEQMDILKTFEKNETEYMRIQRHKIGVDDFELLTIIGRGAFGEVRLCREKGTSNVYAMKKLKKSEMLRRGQVEHVRAERDLLAKVNSAYIVKLYCSFQDDEFLYLIMEFLPGGDMMTLLMRKEILTENEARFYVAEAVLAIESIHKHNYIHRDIKPDNLLLDRDGHLKLSDFGLCKPLHSSNFPNLNENKLGPGRSYKSSMDRNSDCDPRHVASIRTQQEQLLHWQRNRRMLAYSTVGTPDYIAPEVLQKAGYGMECDWWSLGAIMYEMLVGYPPFYSEDPMSTCRKIVNWRTYLKFPDGAKLSLEAKDLICRLLCNVEQRLGTKGAHEIKAHPWFKSLQWDRLYQMEAAFIPEVNDDLDTQNFDKFSEAAAPEQIPPRSGPWKKMLSSTDANFVGYTYKNFEVVNQHNISDIAQLRKKTTRPKTPSIKSLFDTPDPSAKPVLGSFLNILPTHSEVSESAEPSSPSATNVQRQPKAVR 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3288 503 Pfam Protein kinase C terminal domain 380 424 IPR017892 GO:0004674|GO:0005524|GO:0006468
Dere02g3288 503 CDD STKc_NDR_like 53 425 - -
Dere02g3288 503 ProSiteProfiles Protein kinase domain profile. 55 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3288 503 Gene3D Phosphorylase Kinase; domain 1 53 138 - -
Dere02g3288 503 Gene3D Phosphorylase Kinase; domain 1 380 390 - -
Dere02g3288 503 FunFam Non-specific serine/threonine protein kinase 139 206 - -
Dere02g3288 503 FunFam Non-specific serine/threonine protein kinase 26 138 - -
Dere02g3288 503 ProSiteProfiles AGC-kinase C-terminal domain profile. 362 434 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dere02g3288 503 SMART pkinase_C_6 362 426 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dere02g3288 503 FunFam Non-specific serine/threonine protein kinase 260 379 - -
Dere02g3288 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Dere02g3288 503 MobiDBLite consensus disorder prediction 478 503 - -
Dere02g3288 503 SMART serkin_6 55 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3288 503 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524
Dere02g3288 503 CDD MobB_NDR_LATS-like 1 50 - -
Dere02g3288 503 SUPERFAMILY Protein kinase-like (PK-like) 38 417 IPR011009 -
Dere02g3288 503 Pfam Protein kinase domain 56 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3288 503 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 418 - -
Dere02g3288 503 Gene3D Transferase(Phosphotransferase) domain 1 260 379 - -
Dere02g3288 503 Gene3D Transferase(Phosphotransferase) domain 1 139 206 - -
Dere02g3288 503 MobiDBLite consensus disorder prediction 442 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3288 Dere-ChrDere02 41160287 41184610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3288 1 480 AGC Kinase Gene Family AT4G14350 72.464 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Dere02g3288 Pkinase 6e-65 CL0016