Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3287 ATGGAACAGTACGAGAAAGTTGAGAAGATTGGTGAAGGCACCTATGGTGTGGTTTACAAGGCGCGTGATCGGGTCACAAATGAGACCATAGCATTGAAGAAAATTCGGTTGGAGCAGGAAGATGAGGGGGTGCCTAGCACTGCGATACGAGAGATTTCCCTCCTGAAAGAAATGCAACATAGGAACATTGTTAGGTTACAGGATGTAGTGCACAGTGAGAAGCGTTTGTATCTGGTTTTTGAGTACTTGGATTTAGATCTGAAGAAGCACATGGATTCATCTCCTGATTTCGCAAAGGATCCACGACAAATAAAAATGTTTCTTTATCAAATTCTCTGTGGCATTGCTTACTGTCATTCACATAGAGTTCTTCATCGAGACTTGAAACCACAGAATTTGTTGATAGATCGCCGCAGTAATTCTCTAAAGCTTGCAGATTTTGGATTGGCTAGGGCATTTGGTATTCCTGTGAGGACATTCACTCATGAGGTGGTGACACTATGGTACAGAGCTCCAGAAATATTACTTGGATCTCGCCAGTATTCGACGCCAGTTGATGTTTGGTCAGTGGGCTGTATATTTGCAGAGATGGTAAACCAACGACCACTGTTTCCTGGTGACTCTGAGATTGATGAACTGTTTAAAATATTCAGAATCATGGGTACGCCAAATGATGATACATGGCCTGGAGTAACTTCATTACCTGATTTTAAATCAGCCTTTCCCAAGTGGCCTCCTAAGGATCTAGCAACTGTAGTTTCAAATCTTGAGCCAGCTGGCATTGATCTTCTTTCTAGCATGCTTTGCTTGGATCCCAGTAAAAGAATAACCGCCAGGAACGCTCTTGAGCATGAGTACTTCAAAGACATTAAATTTGTACCATGA 885 0.4237 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKDPRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRSNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRIMGTPNDDTWPGVTSLPDFKSAFPKWPPKDLATVVSNLEPAGIDLLSSMLCLDPSKRITARNALEHEYFKDIKFVP 294
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3287 294 SMART serkin_6 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3287 294 Gene3D Transferase(Phosphotransferase) domain 1 86 292 - -
Dere02g3287 294 Pfam Protein kinase domain 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3287 294 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Dere02g3287 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Dere02g3287 294 FunFam Cell division control protein 2 homolog 86 292 - -
Dere02g3287 294 CDD STKc_CDK1_CdkB_like 4 287 - -
Dere02g3287 294 PANTHER CELL DIVISION PROTEIN KINASE 2 287 - -
Dere02g3287 294 FunFam Cell division control protein 2 1 84 - -
Dere02g3287 294 ProSiteProfiles Protein kinase domain profile. 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3287 294 SUPERFAMILY Protein kinase-like (PK-like) 1 290 IPR011009 -
Dere02g3287 294 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere02g3287 Dere-ChrDere02 41111688 41123195 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3287 1 294 Core Cell Cycle Gene Families AT3G48750 85.714 0.0 530
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Dere02g3287 Pkinase 4.6e-81 CL0016