Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3249 ATGGATAATGGGGATATTGATGGCGGTGGAGAAGATGATTTTCGTGGACAGAGGGGTCGCAAGTACCGGCCTGTGTTGGACAACGATCGTGCCGTGCTCGAGATGTCTTCCATGGATCCTGGATCGTCTTCTTCTTCATATCCCCCTCAACCTGCTTCTCTCAAAAAAATAAATGTAAATGCAAGTGCAAATGTGGGGTCTGATGCAAAAGACGTGAACTCTCCTCATCATGCACAAGTTAATGGCTTGCAGAGAGAATCCAAGTTGGAATTGTTCGGTTTCGATTCTCTTGTTAATATTCTTGGGCTCAGAAGTATGACTGGGGAGCAGATTCCACAGCCATCTAGTCCTAGAGATGGCGAGAATATTTCCATCACAGTTGGGCAGCCAAGGCCTACTGGTCCCCAACTAGGTACAATGATGGGCGTATTCATTCCGTGCTTACAAAGCATATTGGGAATCATCTACTACATTCGGTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGAGTCACTGTTACTCGTTGCTTTATGTGGCTTCTGTACTTTCCTTACCTCAATATCACTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGTTTATGTTTCTTCCTAGGAAATGCAGTTGCCGGAGCACTTTACGTGTTGGGAGCTGTAGAAACCTTTTTGAAAGCAGTGCCTGCAGCTGGGATTTTTGGAGAGACTATCACACAAGTTAATGGTACTGGTGTTGCAGAACCAATACACACTCCAAGCTCTCATGATTTGCAAATTTATGGGATAGTTGTGACTGTTTTATTATGCTTTGTTGTATTTGGAGGTGTAAAGATGATTAATCGGGTTGCACCTGCTTTTCTTATACCTGTTTTGTTCTCACTGTCCTGCATATTTTTGGGGATTTTTTTGGCAAGAAAGGATAAGCCTGCAGAGGGAGTCACGGGGTTGAGTTTGGAGACTTTTAAAGAAAACTGGAGTTCGGATTATCAGAAGACTAATGCGAATGGAATTCCAGTACCTGATGGATCCGTGACCTGGAATTTCAATTCATTGGTTGGGCTCTTTTTCCCAGCTGTGACAGGAATAATGGCAGGTTCAAATCGATCATCATCTCTGAAAGATACTCAGCGATCAATTCCTGTTGGAACCCTAGCTGCTACTCTTGTGACTTCTTCTATGTATCTCGTTTCTGTTTTCTTGTTTGGTTCTGTTGCAACCAGAAAGAGGCTATTAACAGATAGGCTACTTACAGCTACAGTTGCCTGGCCTTTTCCATCATTAATTAAAATTGGGATTATACTTTCAACTCTGGGTGCTGCTCTTCAGAGCTTGACAGGTGCCCCACGTCTACTTGCTGCAATAGCCAATGATGATATTTTACCTGTGCTTAACTACTTCAAAGCTGCGGATGGCAGTGAGCCTCACCTTGCTACACTTTTCACTGCTTTCCTCTGTATTGGGTGTGTCGTTATTGGGAATCTGGATCTTATTACTCCAACCGTAACTATGTTCTTCCTTCTATGTTATGCGGGTGTCAATTTGTCCTGCTTCCTTCTGGATCTTCTAGATGCTCCTAGTTGGCGTCCTCGGTGGACTTTTCACCACTGGAGCCTGTCTCTTATTGGAGCTTCACTTTGCATAGTGATCATGTTCCTGATCTCTTGGTCATTCACAGTGGTGTCTTTAGCTCTTGCAAGCCTTATATATAAGTATGTCAGCCTCAAAGGGAAGGCTGGGGACTGGGGAGATGGTTTTAAAAGTGCATATTTCCAACTAGCACTTCGCAGCCTTAGGTCACTAGGAGCAAGCCAAGTGCACCCAAAGAATTGGTATCCGATCCCTTTAATATTCTGCCGGCCCTGGGGCAAATTGCCAGAAAATGTACCTTGCCATCCCAAACTTGCAGACTTCGCCAACTGCATGAAGAAAAAAGGTAGAGGAATGTCCATATTTGTCTCTATACTAGATGGTGACTACCATGAATGTGCTGAAGATGCCAAGGCTGCTTGTAGACAACTAAGCACCTATATCGATTACAAGAACTGTGAAGGTGTTGCTGAGATAGTTGTTGCCCCCAGTATGTCTGAAGGCTTTCGTGGCATTGTTCAGACTATGGGCCTTGGCAATCTTAAGCCAAACATTGTAGTGATGCGCTATCCAGAAATTTGGCGTCGTGAGAACTTAACAGAAATCCCAGCCACTTTCGTTGGGATAATTAATGACTGCATCGTAGCAAACAAGGCAGTAGTCATAGTGAAGGGTCTTGATGAGTGGCCTAATGAGTACCAGAAGCAGTATGGTACAATTGATCTGTATTGGATTGTGAGAGACGGTGGTTTAATGCTTCTTCTCTCCCAGCTTCTTCTTACAAAGAATAGCTTCGAGAGTTGCAAGATTCAGGTCTTTTGTATTGCAGAAGAGGATGCAGATGCAGAGGTGCTGAAGGCTGATGTGAAAAAGTTTCTATATGATCTTCGGATGCAAGCAGAAGTCTTTGTCATAACGTTGAAATGGGATGCACAAACGGATGGTGGTGGGTCTCAGCAAGATGAGTCATTTGAAGCCTTTACTAATGCTCAGCAAAGAATCGATGAGTACTTAACCAAAATGAAGGCAACAGCAACGCACCATGGTGCCCCTCTGATGGCTGACGGTAAGCCCGTGGTTGTGAATGAGAAGCAGGTGGAGAAGTTTCTTTACACGACACTGAAGCTGAACTCCACGATTTTGAAGTACTCAAGAATGGCAGCGGTTGTGCTGGTAAGTCTTCCTCCGCCTCCGCTGAGCCACCCAGCTTATTTCTATATGGAGTATATGGATCTCTTGCTTGAGAATGTACCAAGAATTTTGATTGTAAGAGGATATCGTAGGGACGTTGTGACTCTATTCACATAG 2955 0.444 MDNGDIDGGGEDDFRGQRGRKYRPVLDNDRAVLEMSSMDPGSSSSSYPPQPASLKKINVNASANVGSDAKDVNSPHHAQVNGLQRESKLELFGFDSLVNILGLRSMTGEQIPQPSSPRDGENISITVGQPRPTGPQLGTMMGVFIPCLQSILGIIYYIRFSWIVGMAGIGESLLLVALCGFCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPAAGIFGETITQVNGTGVAEPIHTPSSHDLQIYGIVVTVLLCFVVFGGVKMINRVAPAFLIPVLFSLSCIFLGIFLARKDKPAEGVTGLSLETFKENWSSDYQKTNANGIPVPDGSVTWNFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLVTSSMYLVSVFLFGSVATRKRLLTDRLLTATVAWPFPSLIKIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKAADGSEPHLATLFTAFLCIGCVVIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWTFHHWSLSLIGASLCIVIMFLISWSFTVVSLALASLIYKYVSLKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKAACRQLSTYIDYKNCEGVAEIVVAPSMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKNSFESCKIQVFCIAEEDADAEVLKADVKKFLYDLRMQAEVFVITLKWDAQTDGGGSQQDESFEAFTNAQQRIDEYLTKMKATATHHGAPLMADGKPVVVNEKQVEKFLYTTLKLNSTILKYSRMAAVVLVSLPPPPLSHPAYFYMEYMDLLLENVPRILIVRGYRRDVVTLFT 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3249 984 MobiDBLite consensus disorder prediction 1 53 - -
Dere02g3249 984 Pfam Amino acid permease 142 618 IPR004841 GO:0016020|GO:0055085
Dere02g3249 984 Gene3D Amino acid/polyamine transporter I 136 600 - -
Dere02g3249 984 MobiDBLite consensus disorder prediction 37 53 - -
Dere02g3249 984 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 111 981 IPR004842 GO:0006811|GO:0015377|GO:0016020
Dere02g3249 984 MobiDBLite consensus disorder prediction 8 28 - -
Dere02g3249 984 NCBIfam K-Cl cotransporter 73 984 IPR004842 GO:0006811|GO:0015377|GO:0016020
Dere02g3249 984 FunFam Cation-chloride cotransporter 1 136 600 - -
Dere02g3249 984 Pfam Solute carrier family 12 784 983 IPR018491 GO:0006811|GO:0016020|GO:0022857
Dere02g3249 984 Pfam Solute carrier family 12 652 773 IPR018491 GO:0006811|GO:0016020|GO:0022857
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3249 137 984 Inorganic Solute Cotransporters AT1G30450 83.039 0.0 1455