Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3216 ATGAAGGAGGGAGGTGGAAGCAGGAAGCAGCAGGTGGGTGCAGCGCCACCGTGTGCGGCGTGCAAGCTGCTTCGGAGAAGGTGCAGCGGCGAGGAATGCGTATTTGCTCCACATTTCCCGGCAGATCAGCCTCGCAAGTTCGCTATTGTTCATAAAGTGTTTGGTGCTAGTAATGTCAACAAGATGATTCAGGAGCTACCTATAGATAAGCGAGGAGACGCAGTGAGCAGCATGGTTTATGAAGCAAGCGCAAGAGTGCGAGACCCAGTGTACGGGTGTGTTGGTGCCATCTGTTCTCTTCAGCAACAAGTTCATATGCTTCAGGCCCAATTGGCCCAAGCCCAGGCTGAGGCCCTTCATCTTAGGATGTGCCACGTCACTTCTTCATGTCTATCTAACCCTAGTGGGGGGTCACCATCATCCAAGATCATGGATTCACAAGCCCAATACATACTTGACATGGACATGATCATGGACCAAGCATATGATGATTCAATCTGGTCTTGCTAG 510 0.5098 MKEGGGSRKQQVGAAPPCAACKLLRRRCSGEECVFAPHFPADQPRKFAIVHKVFGASNVNKMIQELPIDKRGDAVSSMVYEASARVRDPVYGCVGAICSLQQQVHMLQAQLAQAQAEALHLRMCHVTSSCLSNPSGGSPSSKIMDSQAQYILDMDMIMDQAYDDSIWSC 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3216 169 ProSiteProfiles LOB domain profile. 16 118 IPR004883 -
Dere02g3216 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 135 - -
Dere02g3216 169 Pfam Lateral organ boundaries (LOB) domain 17 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3216 Dere-ChrDere02 39934834 39936078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3216 1 169 AS2 family AT1G16530 51.462 7.38e-57 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere02g3216 LOB 4.6e-40 No_clan