Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3164 ATGGTCGCCATTGCTACATGCAAGGCAATTGCATTTATTATAACTTCCTCTCATTTCTTTCTTTGGGACACTGTAGTTGGATTTCTGCTGGCTGAAGTGGGCAATCTTGACTTTCGTAGGAAGACAAATTACCTTATTGTTGACTCAAAAACGACTGTCATACAAACTGAAGATGCTTTCAAAGAGTTCACAACAAGGCAAGATATTGCAAATGTGCTGATCAGCCAACATATCTTGAAGTTGAGCTTAAGACTTGGAAATCGTGGATGTTTAGGCTTGCATTGTCTTTTCAATTTTGAGAATCTTCGAGATGGTTCATAA 321 0.3832 MVAIATCKAIAFIITSSHFFLWDTVVGFLLAEVGNLDFRRKTNYLIVDSKTTVIQTEDAFKEFTTRQDIANVLISQHILKLSLRLGNRGCLGLHCLFNFENLRDGS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3164 106 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 7 78 - -
Dere02g3164 106 Pfam ATP synthase (F/14-kDa) subunit 23 80 IPR008218 GO:0034220|GO:0046961
Dere02g3164 106 Gene3D ATPase, V1 complex, subunit F 6 85 IPR036906 GO:0034220
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3164 Dere-ChrDere02 38503935 38506745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3164 23 81 Primary Pumps ATPases(2) AT4G02620 72.881 1.05e-25 91.3