Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3147 ATGAAGGAAGCTTTGTCTGCTGGATTCGAAGGCAATGGCATCGTTTCTTCGCCGCCACCACCGCAAGCTCTGCTCGAGAGGCTCAAGGATTATGGCCAGGAAGCCGCTTTTGCTCTCTTCGACGAGCTCTCTCCTGAAGAACGTGATCTCCTTGTCAAGGACATCGAAAGTTTGGATCTCCCCAGGATTGATCGAATTATTCGATGTTCACTTCGATCTCAAGGGCTGCCAGCGGCTGCCATTGAACCAGTGCCAGAGAGCAGTGTGTCGAAGGTGGAGGAGCGAACCCAAGAGGAAAGAGAGAGATGGTGGAAAATGGGTTTGAAGGCGATATCGGAAGAGAAGTTAGCTGTATTGCTTTTATCCGGCGGCCAGGGGACCCGGCTAGGAAGTTCAGATCCAAAAGGATGCTTCAATATTGGACTTCCATCTGGAAAATCACTTTTTCAACTCCAAGCTGAGAGAATTTTGTATATACAGAGACTAGCTGCTCAATCTACAAATGAGGGTTCAACTTCTTCAGTGCAAATACCCTGGTATATAATGACTAGTCCATTTACAGATGATGCAACACGCAAATTCTTTGAAAGTCATAAGTTTTTTGGTCTTGAAGCAGACCAAGTTATCTTCTTCCAGCAAGGGACTATCCCTTGCGTTTCAGAGGATGGTAAATTAATTATGGAGACTCCATATAGAGTAGCAAAGGCTCCTGACGGGAATGGTGGAGTATATTCAGCTCTGAAATCTTCAAAATTATTGGACGATATGGCCTCGAAAGGAATTAAGTATATTGATTGCTATGGAGTTGACAATGCACTGGTGCGAGTAGCTGATCCATCTTTCCTGGGTTACTTTATTGATAAAGGTGTAACTGCTGCTGCAAAAGTTGTCCGTAAGGCATACCCTCAAGAAAAGGTTGGGCTGTTTGTACAACGAGGTAAAGGTGGACCTCTTACGGTAGTTGAATACAGCGAATTGGATCAATCACTAGCTTCTGCCATCAATCAAGAAACTGGTCGTCTTCGTTTCTGTTGGAGTAATGTTTGTTTACACATGTTCACTTTAGATTTTTTAAACCAAGTGGCAAATGGCCTGGAAAAAGACAGCATTTACCATCTTGCAGAAAAGAAAATTCCTTCCATACATGGATATACAATGGGACTAAAACTGGAACAGTTCATATTTGATGCTTTTCCATATGCTCCCACCACTGCACTTTTTGAGGTACAACGGGAGGAAGAATTTGCACCAGTTAAAAATGCAAACGGATCCAATTTTGACACTCCAGATAGTGCTAGACTGCTTGTTCTTCGGCTTCATGCTCGTTGGGTGGTTGCTGCAGGTGGCTTCTTAACGCATTCAGTGCCCTTATATGCTACTGGCGTTGAAGTATCCCCGCTCTGTTCTTATGCCGGGGAAAACCTGGAACCTATATGTCGAGGAAGAACATTTCATGCACCTTGTGAGATTTCGTTCTAG 1479 0.4415 MKEALSAGFEGNGIVSSPPPPQALLERLKDYGQEAAFALFDELSPEERDLLVKDIESLDLPRIDRIIRCSLRSQGLPAAAIEPVPESSVSKVEERTQEERERWWKMGLKAISEEKLAVLLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILYIQRLAAQSTNEGSTSSVQIPWYIMTSPFTDDATRKFFESHKFFGLEADQVIFFQQGTIPCVSEDGKLIMETPYRVAKAPDGNGGVYSALKSSKLLDDMASKGIKYIDCYGVDNALVRVADPSFLGYFIDKGVTAAAKVVRKAYPQEKVGLFVQRGKGGPLTVVEYSELDQSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIFDAFPYAPTTALFEVQREEEFAPVKNANGSNFDTPDSARLLVLRLHARWVVAAGGFLTHSVPLYATGVEVSPLCSYAGENLEPICRGRTFHAPCEISF 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3147 492 MobiDBLite consensus disorder prediction 1 21 - -
Dere02g3147 492 CDD UDPGlcNAc_PPase 103 422 - -
Dere02g3147 492 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 21 487 IPR039741 -
Dere02g3147 492 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 20 488 IPR029044 -
Dere02g3147 492 FunFam UDP-N-acetylglucosamine diphosphorylase 2 17 488 - -
Dere02g3147 492 SUPERFAMILY Nucleotide-diphospho-sugar transferases 23 490 IPR029044 -
Dere02g3147 492 Pfam UTP--glucose-1-phosphate uridylyltransferase 67 448 IPR002618 GO:0070569
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3147 Dere-ChrDere02 38079514 38096059 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g3147 02 38079514 38096059 Dere02g3147 02 38079514 38096059 ECH