Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere02g3136 | ATGCAAGGAACGACGCCGTTTTCTTCTGTGTACGCCTTCCCTTTCGTCACCACAAGAGCATTCGAATCCAATCCAACCATTTCTTTTCCTCTGAAGCTCAGAGCATCTCTACACGACTATCCTTTCGCAAGCAAAATTGTGGTTAAAAATTTACCATATTCTACTGGTGAGACTAGTCTTGAGAAGCAATTTTCAAACTTCGGTGAGATAGCTGATGTTAAAGTGATTAAAGATGCCGCTAAAAGATGTAAAGGATATGCTTTTATTCAGTACACTCGTCAAGATGATGCCATGCTTGCACTAGAGACAATGGATCAGAAGGTATTTGATGGCCGGAAGATTTATGTAGAACTTGCAAGGCCTGGGAGGGATGCTTTTGGTGGACGCCCGAAGACCTCAGGGCCCCCAAAGAAGTGGCATTTGCCAGATCAAGAGGATGCGGTGGATTGCTGGTACTAA | 459 | 0.4423 | MQGTTPFSSVYAFPFVTTRAFESNPTISFPLKLRASLHDYPFASKIVVKNLPYSTGETSLEKQFSNFGEIADVKVIKDAAKRCKGYAFIQYTRQDDAMLALETMDQKVFDGRKIYVELARPGRDAFGGRPKTSGPPKKWHLPDQEDAVDCWY | 152 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere02g3136 | 152 | PANTHER | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD | 44 | 141 | - | - | |
Dere02g3136 | 152 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 46 | 114 | IPR000504 | GO:0003723 | |
Dere02g3136 | 152 | SUPERFAMILY | RNA-binding domain, RBD | 44 | 133 | IPR035979 | GO:0003676 | |
Dere02g3136 | 152 | SMART | rrm1_1 | 45 | 117 | IPR000504 | GO:0003723 | |
Dere02g3136 | 152 | CDD | RRM_SF | 46 | 117 | - | - | |
Dere02g3136 | 152 | Gene3D | - | 36 | 141 | IPR012677 | - | |
Dere02g3136 | 152 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 44 | 121 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere02g3136 | Dere-ChrDere02 | 37755596 | 37759467 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere02g3136 | 43 | 131 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 34.066 | 6.82e-12 | 60.5 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere02g3136 | 02 | 37755596 | 37759467 | Dere02g3136 | 02 | 37755596 | 37759467 | ECH |