Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3133 ATGACTGTACCTCTTGCGCTTATATATATCTCCGGCGTCCTCTATACTTACATACAAGATCATTTGATTTTAAAAACTTCATTCTTAGCCATGGGGTTCATATTTGGAAAAGCTCAGTTACCTGAGATAGTTGCACTTTTGTTAATGGGATACTTCGCCCATGTAACGTTTTCTTCCTTCACAACTGCACAAAGCAGTGAAGCAAATGCTCTGCTGAACTGGAAAGCTAGCCTTGACAACCAAAGCCAAACTCTCTTATCTTCATGGACTATTAGTACCAGTCCTTGCAGTTGGGTGGGAATTACATGTGATGGGTCCAACTCTGTTTCCAATATTACCCTGGAAAGTCTTGGATTAAGAGGTACGTTTCACAGCCTCAATTTCTCATCTTTCCCCAATCTCCAATCCATGCGATTACGTAACAATTTGTTTTATGGGACTATTCCCTACCATATTGGTGAACTCTCCAAACTTAGCTATATCGATATCACTTATAATGGGTTCATTGGCAACATTCCAACAAGTATTGGCAACTTGTCCAGACTCACGCACCTTTATTTCAATAATAACAATCTCTCTGGAGTAATTCCATTTGAGATCACACAGTTGACTAGAATTGTACATGTGGACATTTCTTATAATTTTTTATATGGCCATATTCCTGAAGATATAGGAAATTTAGGCAACCTATCTGAATTCAATCTGCAACGCAACAGTCTAACTGGCCACATTCCTCAACAAATTGGTAGGTTGATGAGCCTCAAATACTTATTACTGGCAGATAATCAGTTTACTGGTTCCATCCCCCAAGAAATTGGAAATTTGTCCATAATCACACAACTTATTTTGCATAACAACAATCTCTCTGGAGCAATTCCATTTGAGATCACACAGTTGACCAGAATTGTGAGTCTGGGCATAGCTAATAATGTTTTAATTGGCCATATTCCTGAAAATATAGGAAATTTAACCAACCTATCATTCCTGCATCTAGGAGGCAACCACCTTTCTGGCCACATTCCTCCACAAATTGGTAGGCTGACAAACATGGGATACTTGGCACTTGGAGATAATCAATTTACTGGTTCCATCCCCCAAGAAATTGGAATGTTGAAACAACTTGTCCAGCTTGACTTGTCTAGAAACCATTTCTCTGGTAGCATCCCTGCAACTATTGGGAACTTGAGCAATCTATGGTCTCTTTATCTTTATTCTAATCAAATCTCAGGTTCAATTCCTTGGGAAGTGGGGAAACTTTATTTTCTTTACGATTTGCAATTGTCGGACAATATTATCTCAGGGTCAATCCCACCATCTATAGGAAACTTGGCCAATTTGAGCTCCCTCCTTCTTTTTAAAAACAACCTTTCTGGATCAATTCCTTCTAGTATTGGAAACTTGACAGAGCTCTCCATACTAGCATTGGACCGAAACTGCCTTTCCGGATCAATTCCTTCAAGTATTGGAAACTTGACAAAGCTTTCCGAGCTAGTATTGCTTGAAAACAAACTCAGTGGCAACCTTCCCACCGAAATGAATCACCTTACAAATTTGCAATCCTTGCAAATATCTGACAATAATTTTAGTGGTCATTTGCCTCCAAACATTTGTCTTGGTGGGTTGCTCACTAGAATTGCAGTAAACATAAATCATTTCACAGGGCCAATTCCTAGAAGCTTGAAGAACTGCTCTAGCCTTATCAGAGTTAGATTTGATAAAAACCATCTAACAGGAAATATAATACATTCTTTTGGGGTATATCCACATTTGGAGTATATTGATTTGAGTTACAATGTATTTTATGGCCACTTCTCACCCACGTGGGGAAAGTGCCATAATCTTACTAGTCTTAAGATCTCCAACAATAACTTATCCGGGGGCATACCACCAGAAATAAATGAGGCAACGAAGTTACATGTACTTGATTTGTCCTCAAATCATCTAAGAGGAAAGATTCCAAAGGAAATAGGTCAATTGACATTATTGATTGAACTTGCACTGAGTAACAATCAACTTTCAAGCAACATTCCTATTGAAATAGGATCATTGAAGAACCTTGGGAAACTGAGGCTAGCGGATAACCAATTAAGTGGCTCAATTCCAGATCAGCTTGGAGGGTTGCTCAAGTTATACGAATTGAACTTAAGTAGAAATCAGTTCTTAAGCCTTCCCTCTACTTTTGGCCAATTACAACATCTTCAAGATCTCGACCTTAGTGGAAATAATTTCACTGGAATGATCCCCACGGTTCTTGGAGGCTTGCAACAATTGGAAAAGTTGAACCTATCACATAATAGTCTCTCTGGTGCCATTCCTTCAATTTTTGATCATATGAAAAGCTTGATTTGGGTTGACATATCATACAATCAACTACTGGGTCCACTTCCAAATAATATAGCCTTTCGTAGGGCTTCATTTGACTTGTTGAAGAACAACACAGGCTTATGTGGTAATGTATCTGGCTTGCCATTTTGCCCAACGACAAATTACAATCCTCATCATCAAAAGAGCAACCATGTTGTGGTAATTTCTGTTTCCATCACTTTCGGCAGTCTACTGGTGGTAATGTTTTTTGTGGGAATTTCATATACTATTTTCCATCATAATGCAAGAAAAACAAATAATGTAGAAAGATTAGAAGCACAAACTCAAAATTTGTTTGCAATATGGAGTTATGATGGGAAAATGGTATATGAAAACATTATTGATGCCACAGAGGAATTTGATGAAAAATATCTCATTGGGGATGGAGGGTATGGAAGTGTCTATAAAGCTGAATTGTCCACAGGTCAAGTTGTAGCTGTGAAAAAACTTCGCTCTTCACAAAATGGGGAAATCACCCGTCAAAAGTCTTTTACAAGTGAAATTCAAGCCTTGACAGAAATTAGACATCGCAACATCGTGAAGCTCTATGGGTTTTGTTGGCATTCGAAGTTCTCCTTTTTGGTTTACGAATTCCTCAAAGGGGGCAGCTTGGATAAGATACTAAGCAATGAGACACAAGCTATATCATTGGACTGGAATAAGAGGATAAAAATTGTTCAAGGTGTGGCAAATGCTTTGTGCCATATGCATCATGGATGCTCTCCTCCAATTGTTCACCGTGACATATCAAGCAAAAATGTTATTTTAGATTCAAGCTATGAGGCTCACATTTCTGACTTCGGAACAGCCAAGCTTTTGTATCCTGACTCAAGCAATTGGACTTCATTTGCAGGCACCTTTGGCTATGCTGCTCCAGAGCTTGCTTACACAATGGAAGTGACTGAGAAATGTGATGTTTTTAGCTTTGGAGTGTTAGCTCTGGAAATAATTATGGGCAAGCATCCAGGAGATCTCGTAATGTCCTTTTTCTCGTCAACATCTTCTACAACAACAAAATCAGAAGCCTATAATTTGCCATTGAAGGTTGTATTAGACCAAAGGCTAACTTGTCCTTCAGACTCAGTGGCTGAAATGGTGTCCTTGATTGCAAAAATAGCCTTCGCATGCTTGAATGAAAATCTACATTCTCGCCCAATAATGGATCAAGTATGTAAGGAACTTGTCATGCCAACATCACCTGTTTCAGTTCCATTCCATAATATCAAATCAGGTGATTTCATCTGA 3609 0.3865 MTVPLALIYISGVLYTYIQDHLILKTSFLAMGFIFGKAQLPEIVALLLMGYFAHVTFSSFTTAQSSEANALLNWKASLDNQSQTLLSSWTISTSPCSWVGITCDGSNSVSNITLESLGLRGTFHSLNFSSFPNLQSMRLRNNLFYGTIPYHIGELSKLSYIDITYNGFIGNIPTSIGNLSRLTHLYFNNNNLSGVIPFEITQLTRIVHVDISYNFLYGHIPEDIGNLGNLSEFNLQRNSLTGHIPQQIGRLMSLKYLLLADNQFTGSIPQEIGNLSIITQLILHNNNLSGAIPFEITQLTRIVSLGIANNVLIGHIPENIGNLTNLSFLHLGGNHLSGHIPPQIGRLTNMGYLALGDNQFTGSIPQEIGMLKQLVQLDLSRNHFSGSIPATIGNLSNLWSLYLYSNQISGSIPWEVGKLYFLYDLQLSDNIISGSIPPSIGNLANLSSLLLFKNNLSGSIPSSIGNLTELSILALDRNCLSGSIPSSIGNLTKLSELVLLENKLSGNLPTEMNHLTNLQSLQISDNNFSGHLPPNICLGGLLTRIAVNINHFTGPIPRSLKNCSSLIRVRFDKNHLTGNIIHSFGVYPHLEYIDLSYNVFYGHFSPTWGKCHNLTSLKISNNNLSGGIPPEINEATKLHVLDLSSNHLRGKIPKEIGQLTLLIELALSNNQLSSNIPIEIGSLKNLGKLRLADNQLSGSIPDQLGGLLKLYELNLSRNQFLSLPSTFGQLQHLQDLDLSGNNFTGMIPTVLGGLQQLEKLNLSHNSLSGAIPSIFDHMKSLIWVDISYNQLLGPLPNNIAFRRASFDLLKNNTGLCGNVSGLPFCPTTNYNPHHQKSNHVVVISVSITFGSLLVVMFFVGISYTIFHHNARKTNNVERLEAQTQNLFAIWSYDGKMVYENIIDATEEFDEKYLIGDGGYGSVYKAELSTGQVVAVKKLRSSQNGEITRQKSFTSEIQALTEIRHRNIVKLYGFCWHSKFSFLVYEFLKGGSLDKILSNETQAISLDWNKRIKIVQGVANALCHMHHGCSPPIVHRDISSKNVILDSSYEAHISDFGTAKLLYPDSSNWTSFAGTFGYAAPELAYTMEVTEKCDVFSFGVLALEIIMGKHPGDLVMSFFSSTSSTTTKSEAYNLPLKVVLDQRLTCPSDSVAEMVSLIAKIAFACLNENLHSRPIMDQVCKELVMPTSPVSVPFHNIKSGDFI 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3133 1202 Pfam Protein kinase domain 910 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3133 1202 FunFam Leucine-rich receptor-like protein kinase family protein 413 510 - -
Dere02g3133 1202 FunFam Leucine-rich repeat receptor protein kinase MSP1 871 986 - -
Dere02g3133 1202 PANTHER LEUCINE RICH REPEAT KINASE 2 464 1190 - -
Dere02g3133 1202 FunFam MDIS1-interacting receptor like kinase 2 987 1188 - -
Dere02g3133 1202 SUPERFAMILY L domain-like 65 358 - -
Dere02g3133 1202 FunFam MDIS1-interacting receptor like kinase 2 isoform A 221 317 - -
Dere02g3133 1202 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1032 1044 IPR008266 GO:0004672|GO:0006468
Dere02g3133 1202 Pfam Leucine rich repeat N-terminal domain 66 104 IPR013210 -
Dere02g3133 1202 SUPERFAMILY L domain-like 307 603 - -
Dere02g3133 1202 ProSitePatterns Protein kinases ATP-binding region signature. 914 937 IPR017441 GO:0005524
Dere02g3133 1202 PRINTS Leucine-rich repeat signature 754 767 - -
Dere02g3133 1202 PRINTS Leucine-rich repeat signature 733 746 - -
Dere02g3133 1202 Gene3D Ribonuclease Inhibitor 301 417 IPR032675 -
Dere02g3133 1202 Gene3D Ribonuclease Inhibitor 64 223 IPR032675 -
Dere02g3133 1202 Gene3D Ribonuclease Inhibitor 602 700 IPR032675 -
Dere02g3133 1202 Pfam Leucine rich repeat 732 791 IPR001611 GO:0005515
Dere02g3133 1202 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 318 412 - -
Dere02g3133 1202 Gene3D Ribonuclease Inhibitor 226 300 IPR032675 -
Dere02g3133 1202 SUPERFAMILY RNI-like 508 800 - -
Dere02g3133 1202 FunFam Nuclear pore complex protein NUP107 64 220 - -
Dere02g3133 1202 Gene3D Phosphorylase Kinase; domain 1 867 986 - -
Dere02g3133 1202 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 515 829 - -
Dere02g3133 1202 Gene3D Ribonuclease Inhibitor 418 601 IPR032675 -
Dere02g3133 1202 Gene3D Ribonuclease Inhibitor 701 823 IPR032675 -
Dere02g3133 1202 SMART LRR_typ_2 707 729 IPR003591 -
Dere02g3133 1202 SMART LRR_typ_2 515 539 IPR003591 -
Dere02g3133 1202 SMART LRR_typ_2 179 203 IPR003591 -
Dere02g3133 1202 SMART LRR_typ_2 467 491 IPR003591 -
Dere02g3133 1202 SMART LRR_typ_2 323 347 IPR003591 -
Dere02g3133 1202 SMART LRR_typ_2 659 683 IPR003591 -
Dere02g3133 1202 SMART LRR_typ_2 227 251 IPR003591 -
Dere02g3133 1202 SMART LRR_typ_2 371 395 IPR003591 -
Dere02g3133 1202 SMART LRR_typ_2 754 777 IPR003591 -
Dere02g3133 1202 SMART LRR_typ_2 730 753 IPR003591 -
Dere02g3133 1202 Gene3D Transferase(Phosphotransferase) domain 1 987 1188 - -
Dere02g3133 1202 SUPERFAMILY Protein kinase-like (PK-like) 891 1182 IPR011009 -
Dere02g3133 1202 ProSiteProfiles Protein kinase domain profile. 908 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3133 Dere-ChrDere02 37710066 37713844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3133 37 653 Receptor kinase-like Gene Family AT4G08850 35.969 4.75e-105 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere02g3133 Pkinase 3.8e-45 CL0016