Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3132 ATGGTAGCACTGATATGGTGGGTTCTGTTAGTGTTCTCTCCATCTCATGTTTCATCTTTCACGACCGCCCAAAGCAGTGAAGCAAATGCTCTGCTGAAGTGGAAAGCTAGCCTTGACAACCGAAGCCAAGGTCTCTTATCTTCGTGGACTAATACTAGTGCTTGCAATTGGGTAGGAGTTAGATGTGATGGGTCCAACTCCATTTCTGGGATAACTCTTGCAAATCTTGGATTACGAGAAATTGGAATGTTGAAAGCAGTTGGTGAACTTGACTTGTCAAGAAACCATCTCTCTGGTAGCATCCCTACTAATATAGGAAACATGAGCAATTTACGAGCTCTTTATCTTTCTAGAAATGAAATTTCAGGATCACTTCCATGGGAATTGGGGAAACTGCATTCTATTGAAACATTGAAATTGTCAACCAATAATATCTCTGGGTCAATCCCACCTTCCATAGGGAACTTGGCCAATCTAAGCACCCTCACTCTTTTACTAAACAACCTTTCTGGATCAATTCCTTCTAGTATTGGAAACTTGACAATGCTCTGCAAACTAAATTTGGTCAAAAACAAACTTGGTGGTAACCTTCCAATGGAAATGAATAACCTTACAAAGTTGCAATTCTTACATTTATCAGAGAATGATTTCATTGGTTATTTGCCTCATGACATTTGCCATGGTGGGTTGCTTAGTAGGATAACTATTGCAGAAAATCATTTCACTGGTCCAATTCCTAGAAGCTTGAAGAACTGCTCTAGCCTTACTAGAGTTAGGGTTGAAAATAACCAACTAACAGGAAATGTAGCAGATGCATTTGGAGTATATCCTCATTTGTATTATGTTTATTTAAGTAACAATAAATTTTATGGGCAAATGTCACCTATATGGGGAAAGTGCCATAATCTTACAAGCCTCAAGATCTCCAATAATAACTTAACGGGTGGCATCCCGCAAGATCTAGCTGAGGCAACAAAGTTACAAAGACTTGATCTATCCTCAAATCGTCTTACAGGAAAGATTCCAAGGGAATTGGGTCACTTGACATCATTGAGTGAACTCATACTGAGCAACAATCAATTATCAGGCAACATTCCTATTAAAATAGGATTGTTGAAAAACCTTGAAAATTTGAAGCTAGCAAATAACCATTTAAATGGCTTAATTCCATATCAGCTTGGAGGTTTGCTCAAGTTATGGGAATTGAACTTAAGCAGAAATCAGTTCTCAAGCCTTCCCTCTAGCTTTGGCCAATTACAAAATCTTCAAAATCTTGATCTTTGTGGAAATTCTTTCACTGGAGCAATCCCAACAATGCTTGGAGAGTTGCAACGGTTGGGAACATTGAACATATCGCATAACAATTTCTCTGGAACCATTCCTTCAGTTTTTGACGATATGAAAAGCTTGATTTGGGTCGACATATCATACAATCAATTAGAGGGTCCACTTCCAAATACTTTAGCCTTTCATAGGACCTCAATTGAGAGATTGAAAAACAACAAAGGCTTGTGTGGTAATGTATCTGGCTTGCCGATTTGCCCAACAATAAATTACAATCATCATCATGAAAAAAGAAACCATGCTGTGATAGTTTCTGCCATTACTTTGGGTGGCAGCGTGGATAAGATACTAAGCAATGAGACACAAGCTATTGCACTGGATTGGAATAGGAGGATAAAAATTGTTGGCGGAGTTGCTAATGCTTTGTACTACATTCATCATGGATGCTCGCCTCCTATCGTTCACCGTGACATATCAAGCAAAAACGTTATTTTAGATTCAGACTATGAGGCTCACATCTCTGACTTCGGGACAGCCAAGCTTTTGTATCCTGAGTCGAGCAATTGGACTTCATTTGCAGGCACCTTTGGCTATGCTGCTCCAGGTTATGATGCAGAGCTTGCTTACACAATGGAAGTGACCAGGAAATGTGATGTTTATAGCTTTGGAGTGTTAGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCGTAATATGCTTTTTGTCGTCAAAATCTTCAACAGCAGCAACATCAGAAGCCTATGATTTGCCATTGAAGAATGTGTTAGACCAAAGGCTAACTTGTCCTTCAAACTTAGTGTCTGAGAAGGTGTTCTTGATTGCAAAAATAGCCTTTGCATGCTTGAATGAAAGTCCGCATTTTCGCCCAACAATGGATCAAGTATGTAAGGAGCTTGTCATGCCAAAATCACCTCTTTCAGTTCCATTCCATAGCATCAAATTAGGAGATCTCATGTGA 2268 0.392 MVALIWWVLLVFSPSHVSSFTTAQSSEANALLKWKASLDNRSQGLLSSWTNTSACNWVGVRCDGSNSISGITLANLGLREIGMLKAVGELDLSRNHLSGSIPTNIGNMSNLRALYLSRNEISGSLPWELGKLHSIETLKLSTNNISGSIPPSIGNLANLSTLTLLLNNLSGSIPSSIGNLTMLCKLNLVKNKLGGNLPMEMNNLTKLQFLHLSENDFIGYLPHDICHGGLLSRITIAENHFTGPIPRSLKNCSSLTRVRVENNQLTGNVADAFGVYPHLYYVYLSNNKFYGQMSPIWGKCHNLTSLKISNNNLTGGIPQDLAEATKLQRLDLSSNRLTGKIPRELGHLTSLSELILSNNQLSGNIPIKIGLLKNLENLKLANNHLNGLIPYQLGGLLKLWELNLSRNQFSSLPSSFGQLQNLQNLDLCGNSFTGAIPTMLGELQRLGTLNISHNNFSGTIPSVFDDMKSLIWVDISYNQLEGPLPNTLAFHRTSIERLKNNKGLCGNVSGLPICPTINYNHHHEKRNHAVIVSAITLGGSVDKILSNETQAIALDWNRRIKIVGGVANALYYIHHGCSPPIVHRDISSKNVILDSDYEAHISDFGTAKLLYPESSNWTSFAGTFGYAAPGYDAELAYTMEVTRKCDVYSFGVLALEIIMGKHPRDLVICFLSSKSSTAATSEAYDLPLKNVLDQRLTCPSNLVSEKVFLIAKIAFACLNESPHFRPTMDQVCKELVMPKSPLSVPFHSIKLGDLM 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3132 755 SUPERFAMILY L domain-like 81 366 - -
Dere02g3132 755 Gene3D Transferase(Phosphotransferase) domain 1 538 741 - -
Dere02g3132 755 PRINTS Leucine-rich repeat signature 348 361 - -
Dere02g3132 755 PRINTS Leucine-rich repeat signature 327 340 - -
Dere02g3132 755 SMART LRR_typ_2 372 395 IPR003591 -
Dere02g3132 755 SMART LRR_typ_2 443 466 IPR003591 -
Dere02g3132 755 SMART LRR_typ_2 108 131 IPR003591 -
Dere02g3132 755 SMART LRR_typ_2 132 156 IPR003591 -
Dere02g3132 755 SMART LRR_typ_2 204 228 IPR003591 -
Dere02g3132 755 SMART LRR_typ_2 325 348 IPR003591 -
Dere02g3132 755 SMART LRR_typ_2 84 107 IPR003591 -
Dere02g3132 755 SMART LRR_typ_2 396 419 IPR003591 -
Dere02g3132 755 Pfam Leucine rich repeat 421 480 IPR001611 GO:0005515
Dere02g3132 755 Pfam Leucine rich repeat 302 361 IPR001611 GO:0005515
Dere02g3132 755 Pfam Leucine rich repeat 89 145 IPR001611 GO:0005515
Dere02g3132 755 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Dere02g3132 755 SUPERFAMILY Outer arm dynein light chain 1 342 490 - -
Dere02g3132 755 SUPERFAMILY Protein kinase-like (PK-like) 521 735 IPR011009 -
Dere02g3132 755 ProSiteProfiles Protein kinase domain profile. 422 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3132 755 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 209 518 - -
Dere02g3132 755 PANTHER LEUCINE RICH REPEAT KINASE 2 39 164 - -
Dere02g3132 755 ProSiteProfiles Leucine-rich repeat profile. 398 419 IPR001611 GO:0005515
Dere02g3132 755 FunFam MDIS1-interacting receptor like kinase 2 537 741 - -
Dere02g3132 755 ProSitePatterns Tyrosine protein kinases specific active-site signature. 581 593 IPR008266 GO:0004672|GO:0006468
Dere02g3132 755 ProSiteProfiles Leucine-rich repeat profile. 326 349 IPR001611 GO:0005515
Dere02g3132 755 Pfam Protein kinase domain 518 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3132 755 Gene3D Ribonuclease Inhibitor 225 516 IPR032675 -
Dere02g3132 755 Gene3D Ribonuclease Inhibitor 23 168 IPR032675 -
Dere02g3132 755 FunFam Nuclear pore complex protein NUP107 24 175 - -
Dere02g3132 755 Gene3D Ribonuclease Inhibitor 169 224 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3132 Dere-ChrDere02 37692982 37696047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3132 526 643 Receptor kinase-like Gene Family AT4G08850 53.333 6.19e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere02g3132 Pkinase 1.3e-22 CL0016