Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3130 ATGAGAACGAGAATCTCAGTGGTAGGTTTCGTCCTATTACTGATTGCACAAGAATCCACATGTTTCAACAGCAGAGAGACGACGAAAATATCAGAGTTCAGCCTCAAGCTTCAGCAAAAACTGTCCACTCCAAGCTCACAACCACCGTTGGCATCACCTCAAGCTCCTCCTTCACCAGAAACCAAAAGGAAAAGCAGAGTATTGTCTCCGATTGACTACGGAGGAGACCCGACAGGTGTGGAAGAGAGCAGTGATGCGTTTGTGAAAGCTTTGGAGGAAGCATTTGGAGTGGAGAACAATGGAGCTGAATTGGTGGGAGGAGTGAGAGACTTAGGAGGAGTGGTTATTGATTTGGAAGGAGGAAACTACAGAATCGGCAAACCCATTACATTTCCTTCCTCTGCTGGTGGCAATCTTGTGGTAAAAAGTGGAAGCTTGAGGGCAACTGATTCATTTCCAGGTGATCGGCATATGATTGAGCTATTCTCATCAAACTTCCCAAAACCTGATTTTCCAGCATCACTCTTGCAAACCAATGGCTTCACCACTAAGAAAGCTGAAAATGACAAAATTCACTACGAAGACATAACCTTCCGGGACATCCTCTTCGACTCAAGCTATCGGGGCGGTGGGATTCTCATCACTGATTCTGCCAGAATCCGAATTAACAACTGCTTCTTCCTCCATTTCACCACTGAAGGGATTCTCGTCCAACGAGGTCACGAAACCTTCATCTTGAGTTGTTTTCTTGGACAACACTCAACCGTTGGTGGAGATAAAGACGAGAAGGACTTCTCAGGAACTGCCATTGATCTTGCTAGCAATGACAATGCAATTACAGACGTTGTAGTTTTCTCAGCAGCCATTGGCATTGTGCTAAGAGGTCAGGCTAATATAGTCACTGGGGTTCATTGCTATAACAAAGCAACAGGATTTGGTGGTATAGGCATAATGGTGAAATTGGCGGGAAACTCACAAACCAGAATTGATAATTGTTACATGGATTACACGGGTATAGTAATGGAAGACCCAGTTCAAGTGCATGTCACAAATGGGTTATTCTTAGGGGATGCTAATATAGTGTTGAAGTCCATTAAGGGACAAATTTTGGGGTTAAATATAGTTAATAATATGTTTAGTGGGGATCCAAATAAGATGGTTCCAATTGTAAGTTTAGATGGTCAATTTGATAATATTGATCAAGTGGTGATTGATCAGAACAATGTGAATGGGATGGGCTTGAGATCAACGGTTGGGAAGTTGGTTGTGGGAGGAAATGGGACAAAATGGACGGCTGATTTTTCAAGCATTTTGGTGTTTCCCAATAGGATTAATCATTTTCAGTATTCGTTTTATGCTCAAGAGCCCAAGTTTGTAGCACATTGTGTGACCAATGTGTCAGATAATGCAGTAGTTGTGGAGACACAAGAAATAGTAAAAGGGTTGGTTTCCTTCACTGTTGAACAATGA 1470 0.4259 MRTRISVVGFVLLLIAQESTCFNSRETTKISEFSLKLQQKLSTPSSQPPLASPQAPPSPETKRKSRVLSPIDYGGDPTGVEESSDAFVKALEEAFGVENNGAELVGGVRDLGGVVIDLEGGNYRIGKPITFPSSAGGNLVVKSGSLRATDSFPGDRHMIELFSSNFPKPDFPASLLQTNGFTTKKAENDKIHYEDITFRDILFDSSYRGGGILITDSARIRINNCFFLHFTTEGILVQRGHETFILSCFLGQHSTVGGDKDEKDFSGTAIDLASNDNAITDVVVFSAAIGIVLRGQANIVTGVHCYNKATGFGGIGIMVKLAGNSQTRIDNCYMDYTGIVMEDPVQVHVTNGLFLGDANIVLKSIKGQILGLNIVNNMFSGDPNKMVPIVSLDGQFDNIDQVVIDQNNVNGMGLRSTVGKLVVGGNGTKWTADFSSILVFPNRINHFQYSFYAQEPKFVAHCVTNVSDNAVVVETQEIVKGLVSFTVEQ 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3130 489 MobiDBLite consensus disorder prediction 41 80 - -
Dere02g3130 489 PANTHER POLYGALACTURONASE QRT3 10 489 IPR039279 GO:0004650
Dere02g3130 489 Coils Coil 485 489 - -
Dere02g3130 489 SUPERFAMILY Pectin lyase-like 110 418 IPR011050 -
Dere02g3130 489 FunFam Polygalacturonase QRT3 70 484 - -
Dere02g3130 489 Gene3D - 68 481 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3130 Dere-ChrDere02 37616435 37620602 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g3130 02 37616435 37620602 Dere02g3130 02 37616435 37620602 ECH