Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3115 ATGATTTCATTGCCATATTCACCTCCTAAAGCCTGCGTAGGCACCACAAGAAGGCTTTGCAAACCCAAAAATTTCCTCAATAGTTGCTTCCTCCCCCAAAACAATGATTCAGCGACCAAACCATCCATTTCCATCATCCCATTCTCCAGACATCATCAGAAAACCTCTCAGACAAACGAGCACAACACAAGCACAACCTGGGAACTCAATAGAAGAGAAGCAACAGGGCTTGCCTTGGGTTTCGGCCTTTTCAATGTTGTCCTGCAATCACAACCCCAAGCCTCGTCAGCAGCTGAAGCCGTTCCTTGTGAACTGACAGTAGCTGCTTCAGGCCTCGCCTTCTGTGACAAAGTTGTGGGGTCTGGTCCTCAAGCTGCTAAGGGACAGCTCGTTAAGGCACATTATGTGGGGAAGTTGGAGAATGGGACAATTTTCGACAGCAGCTATAATCGTGGCAAGCCTCTAACATTTCGTGTGGGTGTTGGGGAGGTCATCAAAGGATGGGATGAAGGTATATTAGGAGGTGATGGAATTCCTCCCATGCTTGCAGGAGGAAAACGAACATTGAAAATTCCTCCAGAACTTGGATATGGCTCGAGAGGGGCTGGTTGCAGAGGAGGCTCATGTATCATTCCTCCTGATTCGGTCCTATTATTTGACGTGGAGTTCATAAGCAAGGCATGA 684 0.4781 MISLPYSPPKACVGTTRRLCKPKNFLNSCFLPQNNDSATKPSISIIPFSRHHQKTSQTNEHNTSTTWELNRREATGLALGFGLFNVVLQSQPQASSAAEAVPCELTVAASGLAFCDKVVGSGPQAAKGQLVKAHYVGKLENGTIFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGIPPMLAGGKRTLKIPPELGYGSRGAGCRGGSCIIPPDSVLLFDVEFISKA 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3115 227 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 123 224 IPR001179 GO:0003755
Dere02g3115 227 SUPERFAMILY FKBP-like 105 225 - -
Dere02g3115 227 FunFam Peptidylprolyl isomerase 100 226 - -
Dere02g3115 227 Gene3D - 99 227 IPR046357 GO:0003755
Dere02g3115 227 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 37 225 IPR044183 GO:0009507
Dere02g3115 227 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 128 227 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3115 Dere-ChrDere02 37401591 37404102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3115 128 225 Calmodulin-binding Proteins AT5G48570 45.918 6.55e-18 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g3115 02 37401591 37404102 Dere02g3115 02 37401591 37404102 ECH