Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3103 ATGCATAATAAGAGAGAACTTTGTAGGAACTTCCAGCGAGGCAGCTGTCAATATGGAGAAAAATGTAAATTTCTTCATGTACTGCAACAACAGCAAAAGCCCAATGTACCTGGGTTTGGGCAAACTACAAATCCTTTTGGATTTGAGTCCTACACTGGTTCACACCAACAGCATAAGGCCAATCCTTTTGGATTTGGCGTGCAAAACAGCTCCCAATCAACAGGGGGTGCTAATTTAGAATTCAAACAACACCAATTCAAGCCTTTTGAGAATAAATGGACTCGACCTTCTTCCTCACCCCAAAATGGTGCTTCACGGAAAAGTGATGGCAATTCTCAACCAGTGAATCATAAGTGCACAGATCCTGAAAGTTGCAAACGCCAAATTGCAGAAGATTTTGAGCAAGAGAAACCACTTTGGACGCTTACATGCTACAGTCACTGTAAAGGTGCTCCTTGTGACATTGTTGGTGATATCAGCTATGAAGAATTGCGGGCAGCAGCATATGAGGATGCTAAGCGTGGGATGACCTTGCAATCAATAGTTGAGAGAGAGAGAAATCTACTTAATTCCAAGTTACTTGAATTTCAGACCCTACTTTGTGAACCTTACAAAGTACCACTGAATTCTTCTCTTACAAGTCAGAAGTATCAATCTCATGGAACTGATGCAAGTCCATTTTCACGGACTACTCAAAATAATGATCCTCTTTCTGTCTCTAGCTTTAGTCAACTGGGTGCTTCATTGAACATGGGTATTGAAAGGCCCGCTGCACCACCAAATGATACTCTGGCTCAACCTAGTATCTTTGGGACTAAAGGAAACCCATTGTCATCCAACATGACAAGCCAAATTGGTGGAGGCATTGCAGGTGGCCAAATTAACTTCTATTCTACATCAGCTGAGCTTTCAAAGTTTCCTAGTACAACTACACCACAATCATTCATTGTTAGCAATGGTTCTAGCTCCAGTATAATGTTTCCAGCAAGCACAGACATTCAGTTGTTAAGCAAGTCCAAAGAGGATAATTTCTCTGGAGATGTCAGTATTTGGTTAAAAGAGAAATGGAGTCCTGGAGAGATTCCGGAACAAGCCCCTCCCGATGCATTTATAAGGTAG 1119 0.4173 MHNKRELCRNFQRGSCQYGEKCKFLHVLQQQQKPNVPGFGQTTNPFGFESYTGSHQQHKANPFGFGVQNSSQSTGGANLEFKQHQFKPFENKWTRPSSSPQNGASRKSDGNSQPVNHKCTDPESCKRQIAEDFEQEKPLWTLTCYSHCKGAPCDIVGDISYEELRAAAYEDAKRGMTLQSIVERERNLLNSKLLEFQTLLCEPYKVPLNSSLTSQKYQSHGTDASPFSRTTQNNDPLSVSSFSQLGASLNMGIERPAAPPNDTLAQPSIFGTKGNPLSSNMTSQIGGGIAGGQINFYSTSAELSKFPSTTTPQSFIVSNGSSSSIMFPASTDIQLLSKSKEDNFSGDVSIWLKEKWSPGEIPEQAPPDAFIR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3103 372 MobiDBLite consensus disorder prediction 90 119 - -
Dere02g3103 372 SUPERFAMILY CCCH zinc finger 3 30 IPR036855 GO:0046872
Dere02g3103 372 SMART c3hfinal6 2 28 IPR000571 GO:0046872
Dere02g3103 372 Gene3D - 1 62 - -
Dere02g3103 372 ProSiteProfiles Zinc finger C3H1-type profile. 3 29 IPR000571 GO:0046872
Dere02g3103 372 MobiDBLite consensus disorder prediction 88 121 - -
Dere02g3103 372 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 4 27 IPR000571 GO:0046872
Dere02g3103 372 PANTHER NUCLEOPORIN-LIKE PROTEIN 2 7 238 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dere02g3103 zf-CCCH 4e-10 CL0537