Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3099 ATGGCATTTCCTAGGGAATCTAAGTTCACCAATTCTAGCAACTCTGCAAATGTGGATGATTTTGGGGCTGACAATGGAAACAAAGATAATGACACAAGGGAGCATGAGCAGTCCCCTTTTGATCATCAAATTTTAACTGAAACAAGCATTGCTGAGAGAACTGCGGAATGGGGCCTTGTGGTGAACTCAGGAAGTTTTAAAGCAATAGGAGTGACTACCAGGTCCTCTGATGATGGTGACAGAAGCAAAAACTTATCAGATAGATTTGTTGCAGCCGTATCAACAAGGACATCTGAGGAATCAAATTATGGATCAGAGTCGTCAACAGGGGCATTCCCAAGGGTATCGCAAGAGTTGAAGGAGGCATTGTCAACACTACAACAGACATTTGTTGTCTCAGATGCAACCAAACCAGACTGTCCAATAATGTATGCCAGCAGTGGATTTTTCAGTATGACTGGTTATTCTTCAAAGGAGGTTATTGGAAGGAATTGCCGGTTTCTTCAGGGCCCTGGTACAGACCAGAATGAAGTGGCCAAAATTCGTGATGCAGTTAGAAATGGGAAAAGCTATTGTGGCAGGCTTTTAAACTACAAGAAAGATGGAACCTTGTTCTGGAATCTTCTCACTATCACTCCCATCCGAGGTAACCAGGGCAATGTCATCAAATTCATCGGAATGCAGGTTGAGGTGAGCAAATACACAGAAGGTGTGAATGAAAAGGCATTACGGCCAAATGGATTGCCTAAGTCATTAATCCGCTATGATGCTCGTCAGAAGGAGAAAGCTTTGGGTTCCATCACAGAGGTTGTCCAAACTGTTAAGGACCCAAAATCCATTTTTCAGGCTATGAGTCATGATACTGCCAATAAGCATGAAGAGCAAGAGAAAAATAATTTTGATTTTGTTTTGCCGAAGTCTGTTGAAATTGAGAGTACTAGTTCGCCAAGGAGACAAACTACTTCGCTAGACTTCCAAGGTGATACATCACGCATGAGCTCATGTCATGACAGAAGCAAAAATTCAAGAAAGTCAGGGCGCATTTCTTTCATAGGCTTTAAAAGGAGATCTCAGAGCTCTGCCGGGAGGCATGAGGAGAAGCCCATGATTGAGCCAGAGGTTTTGATGACTAAGGACATAGAACGCTCTGACTGTTGGGATCATGCTCAAAGAGAGAGGGATATACGACAGGGAATTGATCTAGCAACCACATTGGAGCGTATAGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCAGATAACCCAATTATATATGCTTCTGATAGCTTTCTTGAACTTACAGAATATACTCGAGAAGAAATTTTGGGAAGAAACTGCCGGTTTCTTCAGGGACCAGAAACAGATCAAGCAACTGTCTCAAAGATTAGAGATGCTATCAGAGAACAGAGGGAAATCACTGTTCAGTTGATCAACTATACCAAGAGTGGAAAGAAGTTCTGGAACTTGTTCCACTTGCAGCCTATGCGAGATCAAAAGGGTGAGCTTCAATACTTCATAGGCGTCCAATTAGATGGGAGTGATCATGTTGAACCTTTAAGAAATCGCCTGTCTGAGAAAACAGAGGAACAAAGTGCGAAGATGGTCAAAGCTACTGCAGAAAATGTTGATGAGGCTGTCAGAGAACTTCCTGATGCTAATTTGAGACCTGAAGATTTGTGGGCAATTCATTCTCGGCCTGTCTTCCCAAGACCTCACAAAAAGGAAAGTCCTTCTTGGGTAGCAATACAAAAGATAACTGCAAATGGTGAAAAAATTGGACTGCATCATTTTAAGCCAATAAGGCCATTGGGCTGTGGAGATACTGGCAGTGTTCATCTTGTGGAACTTCAAGGTACGGGTGAACTATATGCGATGAAGGCAATGGAAAAATCAGTTATGCTAAATCGTAATAAGGTTCACCGAGCATGCATTGAAAGAGAGATTATATCATTACTGGATCATCCTTTTCTTCCCACCCTATACACTTCTTTTCAGACTTCTACACACGTCTGTTTGATAACAGACTTTTGCCCTGGGGGAGAATTGTTTGCATTGCTTGATAAGCAACCCATGAAGATTTTCAGGGAGGAATCAGCAAGATTCTATGCAGCAGAGGTTGTCATTGGTTTGGAATACCTCCATTGTTTAGGTGTTATTTATCGAGACTTAAAGCCTGAAAATATTTTACTTCAGAAGGATGGCCATGTTGTATTAACAGATTTTGATTTATCATTCATGACTTCCTGTAAACCCCAGATTTTGAAGCATCCACCACCTAGCAGTAGAAGATCACGAAGTCAACCACCACCAACATTTGTTGCAGAGCCTGTTACACAATCAAATTCATTCGTTGGAACTGAAGAATACATAGCTCCTGAAATTGTAACGGGAGCTGGGCATACTAGTGCTATAGATTGGTGGGCTCTTGGTATATTGTTGTATGAAATGCTCTATGGTCGTACGCCATTCAGGGGAAAGAATAGGCAAAAGACATTTGCCAACATCTTGCACAAAGATCTAACCTTTCCAAGCAGCATCCCGGTAACTCTTGCAGCCAGGCAGTTGATTAATGCACTATTGCAAAGAGAGCCAAGCAATCGTTTAGGTTCAAGTACTGGAGCCAATGAAATCAAGCAACATCCATTTTTCCGTGGAATTAATTGGCCTTTAATCCGTTGCATGAGTCCACCACCTTTGGAAGCTCCTCTTCAATTGATAGGGAAACTCCCAATGGCCAAAGATGTGAAATGGGAAGATGATGGGGTGCTTGTTCGCTCAATAGATATGGATATCTTCTGA 2802 0.4197 MAFPRESKFTNSSNSANVDDFGADNGNKDNDTREHEQSPFDHQILTETSIAERTAEWGLVVNSGSFKAIGVTTRSSDDGDRSKNLSDRFVAAVSTRTSEESNYGSESSTGAFPRVSQELKEALSTLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRNCRFLQGPGTDQNEVAKIRDAVRNGKSYCGRLLNYKKDGTLFWNLLTITPIRGNQGNVIKFIGMQVEVSKYTEGVNEKALRPNGLPKSLIRYDARQKEKALGSITEVVQTVKDPKSIFQAMSHDTANKHEEQEKNNFDFVLPKSVEIESTSSPRRQTTSLDFQGDTSRMSSCHDRSKNSRKSGRISFIGFKRRSQSSAGRHEEKPMIEPEVLMTKDIERSDCWDHAQRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIYASDSFLELTEYTREEILGRNCRFLQGPETDQATVSKIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSEKTEEQSAKMVKATAENVDEAVRELPDANLRPEDLWAIHSRPVFPRPHKKESPSWVAIQKITANGEKIGLHHFKPIRPLGCGDTGSVHLVELQGTGELYAMKAMEKSVMLNRNKVHRACIEREIISLLDHPFLPTLYTSFQTSTHVCLITDFCPGGELFALLDKQPMKIFREESARFYAAEVVIGLEYLHCLGVIYRDLKPENILLQKDGHVVLTDFDLSFMTSCKPQILKHPPPSSRRSRSQPPPTFVAEPVTQSNSFVGTEEYIAPEIVTGAGHTSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVTLAARQLINALLQREPSNRLGSSTGANEIKQHPFFRGINWPLIRCMSPPPLEAPLQLIGKLPMAKDVKWEDDGVLVRSIDMDIF 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3099 933 Gene3D PAS domain 129 314 - -
Dere02g3099 933 ProSiteProfiles Protein kinase domain profile. 598 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3099 933 Pfam Protein kinase domain 600 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3099 933 ProSiteProfiles PAS repeat profile. 397 470 IPR000014 -
Dere02g3099 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Dere02g3099 933 CDD STKc_phototropin_like 596 907 - -
Dere02g3099 933 MobiDBLite consensus disorder prediction 753 778 - -
Dere02g3099 933 MobiDBLite consensus disorder prediction 309 330 - -
Dere02g3099 933 Gene3D PAS domain 386 550 - -
Dere02g3099 933 MobiDBLite consensus disorder prediction 1 41 - -
Dere02g3099 933 FunFam Putative LOV domain-containing protein 129 285 - -
Dere02g3099 933 Gene3D Transferase(Phosphotransferase) domain 1 682 893 - -
Dere02g3099 933 MobiDBLite consensus disorder prediction 1 21 - -
Dere02g3099 933 SUPERFAMILY PYP-like sensor domain (PAS domain) 416 512 IPR035965 -
Dere02g3099 933 PANTHER FLIPPASE KINASE 1-RELATED 106 901 - -
Dere02g3099 933 MobiDBLite consensus disorder prediction 24 41 - -
Dere02g3099 933 NCBIfam PAS domain S-box protein 423 515 IPR000014 -
Dere02g3099 933 NCBIfam PAS domain S-box protein 141 232 IPR000014 -
Dere02g3099 933 SUPERFAMILY Protein kinase-like (PK-like) 575 906 IPR011009 -
Dere02g3099 933 FunFam LOV domain-containing protein 597 681 - -
Dere02g3099 933 Gene3D Phosphorylase Kinase; domain 1 597 681 - -
Dere02g3099 933 CDD PAS 142 231 IPR000014 -
Dere02g3099 933 CDD PAS 420 512 IPR000014 -
Dere02g3099 933 ProSitePatterns Protein kinases ATP-binding region signature. 604 627 IPR017441 GO:0005524
Dere02g3099 933 ProSiteProfiles PAC domain profile. 189 243 IPR000700 -
Dere02g3099 933 SMART pac_2 474 516 IPR001610 -
Dere02g3099 933 SMART pac_2 192 234 IPR001610 -
Dere02g3099 933 Pfam PAS domain 420 512 IPR000014 -
Dere02g3099 933 Pfam PAS domain 136 232 IPR000014 -
Dere02g3099 933 ProSiteProfiles PAS repeat profile. 115 188 IPR000014 -
Dere02g3099 933 SMART serkin_6 598 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3099 933 FunFam LOV domain-containing protein 386 550 - -
Dere02g3099 933 ProSiteProfiles PAC domain profile. 471 525 IPR000700 -
Dere02g3099 933 SMART pas_2 117 186 IPR000014 -
Dere02g3099 933 SMART pas_2 399 468 IPR000014 -
Dere02g3099 933 FunFam Putative LOV domain-containing protein 682 896 - -
Dere02g3099 933 MobiDBLite consensus disorder prediction 309 367 - -
Dere02g3099 933 SUPERFAMILY PYP-like sensor domain (PAS domain) 136 228 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3099 Dere-ChrDere02 37097339 37123146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3099 50 932 AGC Kinase Gene Family AT5G58140 75.197 0.0 1339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere02g3099 Pkinase 7.2e-61 CL0016