Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3094 ATGTTTCCTAGACTAATACACTCACACGAAGGGATGGTTGGACAGGAAGACATGCAGGGTGGTTCGAACCTCAATCACAACAAGGCAGACCCATGTCTGGTGTTGACTGCCGATCCCAAACCTCGTCTCCGTTGGACCCAGGACCTCCATGAACGATTCGTCGATGCTGTTACCCAGCTTGGGGGTGCCAGTAAAGCTACTCCAAAAGCAATCATGCGGACAATGAATGTCAAGGGTTTGACTCTATTTCATTTAAAGAGTCATCTTCAGAAGTACAGACTTGGTAAGCAATCAGGGAAAGATATGGGTGAGGGATGCAAAGATGGAATATCGGGTTCATATCTTTTAGAAAGCCCTGGTGCTGATAACTCTTCTCCACAGTTGCCAACTTCTGATACCAATGAGGGTCATGAAATCAAGGAGGCTTTAAGAGCACAGATGGAAGTGCAAAGTAAACTACATTTGCAAGTGGAGGCAGAGAAGCACTTGCAGATTCGCCAGGATGCAGAACGGAGATATATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATTGGTGCTACAGTTATAGACACAGACAGCCAAAAATCTCAAGGACTTGGAAGTAAAGCACCAAGAGGTCCCTTGCTTGACCCTCTTGGCTTTTACTCCTTACCATCTGCTGGGGTGACTGGAGTAGTACATGTTCCCGAAGAAGAAGCACCACCGAATCTCCATCCTCAAAGGGCTGACTGTTCCACCGAAAGTTGCCTAACATCACACGAGAGTCCACTAGAAGGATCTCCCAGTGGTGGGGCGAAAAAGAGGATGCTGGGCTTGGACTCCATGGCAGCAGCCCCTGTGATCTGGAGTGAAGCCACAATGAGAACTCAAGGCATCAATGTGGCCCAGGGTACCCTGCATGGAATAACTAGGTATGGCATATAG 939 0.4792 MFPRLIHSHEGMVGQEDMQGGSNLNHNKADPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGISGSYLLESPGADNSSPQLPTSDTNEGHEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGATVIDTDSQKSQGLGSKAPRGPLLDPLGFYSLPSAGVTGVVHVPEEEAPPNLHPQRADCSTESCLTSHESPLEGSPSGGAKKRMLGLDSMAAAPVIWSEATMRTQGINVAQGTLHGITRYGI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3094 312 MobiDBLite consensus disorder prediction 237 271 - -
Dere02g3094 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 265 IPR044848 GO:0003700
Dere02g3094 312 FunFam Myb family transcription factor 39 97 - -
Dere02g3094 312 Pfam MYB-CC type transfactor, LHEQLE motif 138 183 IPR025756 -
Dere02g3094 312 Pfam Myb-like DNA-binding domain 43 93 IPR001005 -
Dere02g3094 312 NCBIfam myb-like DNA-binding domain, SHAQKYF class 40 95 IPR006447 GO:0003677
Dere02g3094 312 Gene3D - 39 97 - -
Dere02g3094 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 97 IPR017930 -
Dere02g3094 312 SUPERFAMILY Homeodomain-like 40 96 IPR009057 -
Dere02g3094 312 MobiDBLite consensus disorder prediction 113 134 - -
Dere02g3094 312 MobiDBLite consensus disorder prediction 117 133 - -
Dere02g3094 312 MobiDBLite consensus disorder prediction 246 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3094 Dere-ChrDere02 36988413 36995567 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3094 21 257 G2-like Transcription Factor Family AT3G24120 44.939 2.65e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere02g3094 Myb_DNA-binding 5.3e-06 CL0123