Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3092 ATGTATCAACCAAAGAGTGTTCCTAGTTCAGGTCTAGTTGGCAGCAACTCTTTGGTGCATGGTCAGCAATTTGATTGTGGTGGCAATACAATGGATCCAGTCAATGGAGGGAACAGTCTCATCAGCAATCCCAATCTCAGCTCAAAGCAACGGTTACGTTGGACTCATGAACTCCATGAACGCTTTGTTGATGCTGTGGCACAACTTGGTGGGCCAGATCGTGCCACACCTAAAGGTGTCCTCAGAGTGATGGGTGTACAAGGCTTGACAATATATCACGTCAAAAGCCATCTGCAGAAATATCGACTTGCTAAATACCTGCCTGACTCCTCATCTGATGGGAAAAAGGCAGACAAGAAAGAACCAGGGGATATGCTTTCCAATCTAGATGGTTCATCAGGGATGCAAATTACTGAGGCACTAAAGCTGCAAATGGAGGTGCAGAAGCGATTACATGAACAATTAGAGGTTCAGAGACAGCTACAATTACGGATTGAAGCCCAGGGTAATTACTTGAAGAAGATAATTGAAGAGCAACAGCGGCTCAGTGGGGTTCTCTCTGAAGCACCCAGCTCGGGGGATGCAGCCTCAGTACCGGGTGATATTAGCCAAGACCCTGACAATAAGACTGACCCAGCAACCCCTGCCCCCACATCTGAATGCCCCCTTCAGGAAAAAGCTGCTAAAGAACGTGCTCCAGCAAAGAGTCTTTCAGTTGATGAATCCTTTTCATCTCACAATGAACCATTAACACCAGATTCTGGCTGCCATGTTGGTTACCCTACCGACAGCCCTAAAGGGGAGAGATCGAAAAAGAAGCAGCAGGTGAGCATGGAGGGATCATATTCTAAACCAGAAATGGTGCTTACACATCAGATACTCGAGTCAAGCATGTCATCGTGTCAGCAATTGAGCACAGTTTTCCTTACCCAGGAGCAGTTTGATCCTTCATTAGGTGTATCTACCAGAAGTAACGAGGAATTGGAGAAGGTTGGGGTTAGCAACATGTGA 1011 0.4659 MYQPKSVPSSGLVGSNSLVHGQQFDCGGNTMDPVNGGNSLISNPNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKEPGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGNYLKKIIEEQQRLSGVLSEAPSSGDAASVPGDISQDPDNKTDPATPAPTSECPLQEKAAKERAPAKSLSVDESFSSHNEPLTPDSGCHVGYPTDSPKGERSKKKQQVSMEGSYSKPEMVLTHQILESSMSSCQQLSTVFLTQEQFDPSLGVSTRSNEELEKVGVSNM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3092 336 MobiDBLite consensus disorder prediction 109 125 - -
Dere02g3092 336 Gene3D - 48 107 - -
Dere02g3092 336 MobiDBLite consensus disorder prediction 108 131 - -
Dere02g3092 336 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Dere02g3092 336 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Dere02g3092 336 MobiDBLite consensus disorder prediction 186 284 - -
Dere02g3092 336 FunFam Myb family transcription factor 48 106 - -
Dere02g3092 336 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Dere02g3092 336 Pfam MYB-CC type transfactor, LHEQLE motif 135 181 IPR025756 -
Dere02g3092 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Dere02g3092 336 MobiDBLite consensus disorder prediction 203 217 - -
Dere02g3092 336 Coils Coil 138 158 - -
Dere02g3092 336 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 47 327 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3092 Dere-ChrDere02 36972053 36974981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3092 84 336 G2-like Transcription Factor Family AT2G01060 63.529 5.01e-99 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere02g3092 Myb_DNA-binding 2.2e-08 CL0123