Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3081 ATGGGCGTGGAGGATGAAATTTCTCCTGCCGATGCTCGTGGGCCTCCCGGCAAGGACCAGCAAGCTGCTGGAGTGGGAATACTTCTTCAGATCATGATGTTGGTTTTGTCTTTCGTTCTTGGTCACGTCCTTCGTCGCAAGAGGATACATGTTATTCCCGAAGCCAGTGCTTCTCTTCTCATAGGTTTAATTGTTGGTGGACTTGCTAACATTTCAGACACAGAAACTAATATCAGTTATCTTGGTATGCTATATTGTTTTTTTTCCTTGACTGTTGAGCTTACTCAGTCTGGGTTCAGTCTCGCACCTAAACCTTTCTTCTCAAATTTTGGAGCAATTGTGACATTTGCTATATTCGGTACCTTTCTAGCTTCAGTTGTCACGGGTGTTTTAGTTTATCTTGGTGGTTTGATCTACCTCATGTATAGACTTCCTTTTGTGGAGTGCCTAATGTTTGGTGCTCTTATATCAGCAACTGATCCTGTTACTGTTTTGTCCATATTTCAGGAACTTGGCACAGATGTCAACCTATATGCCTTGGTGTTTGGAGAATCGGTCTTGAATGATGCAATGGCGATTTCCTTGTACAGGACAATGTCATTGGTCAAAACTCACCCTTCTGGACAAAATTTCTTCATGGTGGTTGTGAGATTTTTGGAGACTTTTGTTGGCTCAATGTCTGCAGTTAATATAAAGCTTGAGGCAGATGTCAAGTCTGTCAAGTCTTGCCTCTTGTTTTCTCTTCTTGTGTGATTGGATATTGACAAGTACATGCTTGCAGAAGGTCTTGGCCTGTCTGGTATTGTGTCAATACTGTTCACAGGAATAATATTCATTGGGGTTGCAAGGGCAGCAAATGTCTTCTCTTGTGCTTATCTGGTCAATTTGGCCAGACCGGCAAATCGAAAGATACCTCCAAAACATCAGAAAGCACTTTGGTATAGTGGACTTAGAGGGGCTATGGCATTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAAACCATATTCACTGCAACTACAGCCATAGTAGTTCTGACGGTATTACTAATTGGTGGTTCAACAGGTACTATGCTGGAAGCCCTAGAAGTAGTAGGTGACAGTCATAACATTGACAGCCCTTTGAGTCCAGTGGGCAACATTACTAATTTTGAGGGAAACAATGGTTATGTTGCTCCTTCTTATGATGAAGAATCATCATCAGGCAACAAAATCAAAATGAAACTAAAAGAATTCCACAGGAGTGCTGCATCTTTTACAGCATTAGATAAAAATTACCTCACCCCATTCTTTACAAGTCAAAATGGAGATGAAGACGATGAAGAGGAACCTATGACTACAAGAAGAACCTTCCAGGGCAATGACCATTATTATAGTAACTCTCGCTAA 1404 0.4167 MGVEDEISPADARGPPGKDQQAAGVGILLQIMMLVLSFVLGHVLRRKRIHVIPEASASLLIGLIVGGLANISDTETNISYLGMLYCFFSLTVELTQSGFSLAPKPFFSNFGAIVTFAIFGTFLASVVTGVLVYLGGLIYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVKTHPSGQNFFMVVVRFLETFVGSMSAVNIKLEADVKSVKSCLLFSLLVXLDIDKYMLAEGLGLSGIVSILFTGIIFIGVARAANVFSCAYLVNLARPANRKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALEVVGDSHNIDSPLSPVGNITNFEGNNGYVAPSYDEESSSGNKIKMKLKEFHRSAASFTALDKNYLTPFFTSQNGDEDDEEEPMTTRRTFQGNDHYYSNSR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3081 467 Gene3D - 146 198 - -
Dere02g3081 467 MobiDBLite consensus disorder prediction 435 467 - -
Dere02g3081 467 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere02g3081 467 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere02g3081 467 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere02g3081 467 Pfam Sodium/hydrogen exchanger family 33 278 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Dere02g3081 467 PANTHER SODIUM/HYDROGEN EXCHANGER 16 277 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3081 Dere-ChrDere02 36790000 36798230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3081 263 449 Antiporters AT5G55470 27.962 1.08e-06 49.3