Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3073 ATGGAGGACGATTGGGATCTCCACGCCGTCGTCAGAGGCTGCGCCGCCGTCACCTCCACCACAGCAACCAACACTGCCACTGCCACTGCCGTGGCCCTCAGCAGCAGCAGCAGTAGTTCTACTGGAAGCTCTTCTGTATCTTCTTCCTCTGCAGGATTTGTGCCTCCCATGTTTCCCATATTTGAACCAAAGGCTTTGAATTCCTCCATTGCACAATTGCATGAGCTTCTTAAGCCCAGTTTTTTCTTCCCCAAATCTCACTTTCTTCCCAGTTCCTTCCAACTCCAAGCTTCTTCTTCTTCCTCTTCTTCACCCTTGTCATCTTCCTCCTTGTCATATTCTTCTTCCTCTGTAACCAAATCAGCTCAGACTCAGACTCAGACACAGCAGAAACAACACCATCTCTCTGGTACTAAGCACTCTCAGGCTGGTTCTCTCACCACCCCAAGATCCAAAAGAAGGAAGAACCAGCTCAAGAAAGTTTGTCAGGTTCCAGCTGAAGCTCTATCCTCGGACATTTGGGCATGGCGGAAATATGGACAGAAACCCATTAAAGGGTCACCATATCCAAGATGTAGCAGCTCAAAAATGTGTTTGGCCCGGAAACAGGTGGAGCGGGATAGATCCGACCCGACAATGTTCATAGTCACCTACACATCGGAGCACAACCACCCCGCTCCGACCCATCGCAACTCTCTATCCGGGTCGACCAGACAGAAGTCCGCCGCTGCTGCAGAGGACTCCGACAAGGCTCCGACGAAACCCGTTTCTCCGGCGACCAGCTCCGGGGTGGAAGAAGAGCTCGCATCTCAGGGGACAACGAGGTCGGAAAGCAAAGAGCAGGAAGAAAATGAGTTCGGGTTGTCCGATATGGAGCTATCGGATGACTTCTTTGAGGGCTTAGATGAACTCCAAGGGTCGCCGGCCCCGCCACATGCGGCGGCCGGGGACTGCTTCGTCGACCCGTTTTCGCCGGGTATTGAGTTTCCTGGTTGGGTGGCTAATGATGCGTCTAGTGCTGCCGGGGGAATTTAG 1035 0.5295 MEDDWDLHAVVRGCAAVTSTTATNTATATAVALSSSSSSSTGSSSVSSSSAGFVPPMFPIFEPKALNSSIAQLHELLKPSFFFPKSHFLPSSFQLQASSSSSSSPLSSSSLSYSSSSVTKSAQTQTQTQQKQHHLSGTKHSQAGSLTTPRSKRRKNQLKKVCQVPAEALSSDIWAWRKYGQKPIKGSPYPRCSSSKMCLARKQVERDRSDPTMFIVTYTSEHNHPAPTHRNSLSGSTRQKSAAAAEDSDKAPTKPVSPATSSGVEEELASQGTTRSESKEQEENEFGLSDMELSDDFFEGLDELQGSPAPPHAAAGDCFVDPFSPGIEFPGWVANDASSAAGGI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3073 344 ProSiteProfiles WRKY domain profile. 165 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g3073 344 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 306 IPR044810 GO:0003700
Dere02g3073 344 MobiDBLite consensus disorder prediction 218 317 - -
Dere02g3073 344 MobiDBLite consensus disorder prediction 120 151 - -
Dere02g3073 344 MobiDBLite consensus disorder prediction 120 162 - -
Dere02g3073 344 SMART WRKY_cls 170 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g3073 344 MobiDBLite consensus disorder prediction 272 286 - -
Dere02g3073 344 Pfam WRKY DNA -binding domain 172 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g3073 344 Gene3D WRKY domain 154 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g3073 344 MobiDBLite consensus disorder prediction 218 242 - -
Dere02g3073 344 MobiDBLite consensus disorder prediction 254 271 - -
Dere02g3073 344 SUPERFAMILY WRKY DNA-binding domain 168 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3073 Dere-ChrDere02 36679640 36681238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3073 1 344 WRKY Transcription Factor Family AT4G01250 44.413 9.32e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere02g3073 WRKY 1.2e-17 CL0274