Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3035 ATGAATTGTCAAAGAACAATTACCACGGATAAAGATGTAAGCTTGAAATCTAGTCAAGCATCTGGTGGAGATTATGATGCAAAATTAGTTGAAACAATTAACACTGCCATAGTAGATAAACGCCCTTCTGTTAGATGGGAAGATGTTGCTGGTCTAGAAAAGGCAAAGCAAGCTTTAATGGAAATGGTTATTTTGCCAACTAAGAGAAGAGACCTGTTCCCTGGTCTTCGAAGGCCCGCTAGAGGTTTGCTTCTCTTTGGTCCACCTGGTAATGGAAAAACCATGCTTGCCAAAGCAGTGGCTTCAGAATCAGAAGCAACATTCTTTAACATATCTACAGCATCGTTGACATCAAAATGGGTTGGTGAAGGTGAAAAGCTTATCCGAACTCTATTCATGGTAGCTATTTTCAAGCAACCATTTGTGATTTTCATTGATAAGGACATTACCATTAAGATAATATCATTTTCTCAACAAGGGCTAAGAACTATATGCGTTCTTTCTGCAAATGGAGTCATATCAAGTGTCACACTTCATCATCTTGATTCTTCTAGGGGAACATTGACATATGAGGTGCAGCATATTTTGTTTTTCAAATAA 600 0.38 MNCQRTITTDKDVSLKSSQASGGDYDAKLVETINTAIVDKRPSVRWEDVAGLEKAKQALMEMVILPTKRRDLFPGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNISTASLTSKWVGEGEKLIRTLFMVAIFKQPFVIFIDKDITIKIISFSQQGLRTICVLSANGVISSVTLHHLDSSRGTLTYEVQHILFFK 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3035 199 Gene3D - 42 146 IPR027417 -
Dere02g3035 199 PANTHER AAA DOMAIN-CONTAINING 23 146 - -
Dere02g3035 199 Pfam ATPase family associated with various cellular activities (AAA) 83 146 IPR003959 GO:0005524|GO:0016887
Dere02g3035 199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 146 IPR027417 -
Dere02g3035 199 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3035 Dere-ChrDere02 36193275 36194488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3035 42 147 Calmodulin-binding Proteins AT3G56690 47.664 3.75e-27 106