Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3023 ATGGATGGGAAGGTGGAAGAGAGGGATTTGGAGATAGAAGGTGGGATGGCGATGATCATGGGGAATGATGATGGGAAAGAAGGCACGGATGGTATATCAGGACCAGCCTCGGACGACGTCGTCAAAGACAGGTTCCTCAAAGAGCCATTGCTTCTCAAGAACAATAGGATGAACAACACCTCCCAGCTCGCCATTGTCGGAGCTAATGTCAGCCCTATCGAAAGTCTTGATTACGAGATCATTGAGAATGATCTCTTCAAACAGGATTGGAGATCTAGAACTAAGGTCGAGATATGCCAATACGTTGTTCTTAAATGGACTCTTGCGCTTCTTATCGGTTTAATAACAGGACTTGTTGGCTTTTTTAATAACCTTGCTGTTGAGAATATTGCTGGTTTCAAGCTTCTATTCACCAACAATCTCATGCTGAAGGAGAAGTATTATCAGGCCTTTGCAGCATTAACTGGTTGTAACATGATTTTGGCCATTGCTGCTGCTGCTATCTGTGCCTACATTGCCCCTGCAGCTGCAGGGTCTGGCATACCTGAGGTGAAGGCCTACCTCAATGGTATAGATGCTCATTCTATATTGGCCCCAAGTACCCTTTTTGTAAAGATTTTTGGTTCCATTCTTGGTGTTGCTGCAGGGTTTGTTGTTGGTAAGGAAGGGCCTATGGTCCATACTGGTGCTTGCATAGCTAATTTACTAGGACAAGGTGGTTCTAAGAAATATCGGCTCACCTGGAAATGGCTCAGATTCTTTAAAAATGATCGAGATAGAAGGGATTTGATCACATGTGGTGCAGCTGCTGGGGTTGCTGCTGCCTTCCGTGCTCCGGTGGGGGGTGTCCTTTTTGCACTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTGTGGCGGACTTTCTTTACAACTGCTGTAGTAGCAGTAGTGCTGAGAAGTTTCATGGAACTGTGTCGGGGTGGAAAATGTGGTCTTTTTGGGGAAGGTGGGCTGATAATGTTTGATGTTAATGAGGCAAAGCCTTCATACAGCACCCCTGACCTCCTCGTTGTTATATTTCTTGGAGTTATTGGAGGCATTTTTGGAAGCCTTTATAATTATCTTGTGGACAAGGTCCTTCGCACTTATAGCATCATAAATGAGAGAGGCCCTATATGTAAAATTGTACTTGTTGCCGTGATCTCCTTTTTGACCTCTTGTTGTTCATATGGCCTTCCATGGCTATCACAGTGCATCCCTTGTCCTTCAAACTTGGGTGACCAGTGCCCCACCATAGGTCGCTCTGGACACTACAGGAATTACCAATGTCCTCCCAAACACTACAATGACCTTGCCTCTCTCTTTTTCACTACTAATGATGATGCCATCCGCAACCTCTTCACCTCTGGCTCAGACAAAGAGTTTCAGCTCTCTACTCTTCTAATCTTCTTTGTTGCCATATACTTCCTCGGAATCATCACTTATGGAATTGCTGTTCCCTCTGGCCTCTTCATTCCTGTCATTCTTGCTGGGGCCTCGTATGGGCGCCTCGCTGGAAGTCTTTTAAGTTCATTCACTCTGCTTGATGAGGGATTGTTTGCCCTCCTCGGAGCTGCATCCTTCCTAGGTGGTACCATGAGAATGACTGTTTCGCTATGTGTTATACTCCTTGAACTCACTAATGACCTCCTTATGCTTCCATTGGTGATGCTGGTTCTGCTTATTTCAAAGACTGTAGCTGATAGCTTCAACTCAGGTGTATATGATCAGATTGTGAAAATGAAGGGGCTGCCTTATATGGAAGCACATGCCGAACCATACATGAGGCAGTTAGTTGCAAGTGATGTTGTTTCTGGCCCTTTGGTTACATTTTCTGGGATTGAAAATGTGGGAAATATCATTCATGCTTTGAGGACTACTGGGCACAATGGGTTTCCTGTGATCGATGAGCCTCCTTTCTCGCCTGCTTCTGAGTTGTGTGGGTTGGTTTTAAGGTCTCATCTGCTAGTGCTTCTTAAGAAAAAGAATTTCACAAAGCAGAAGATGATGACAGGGTCTACCATTATGAGAAACTTCAAAGCGCGAGATTTTGCAAAGCCAGGATTAGGCAAGGGTGTCAAGCTTGAGGATTTGGACATTTTGGAGGAGGAGATGGAAATGTATGTTGATCTCCATCCAATTACTAATTCTTCACCATATACGGTAGTGGAGTCGATGTCTCTAGCGAAAGCTGCAGTTCTTTTCCGGCAACTCGGCCTCAGGCACTTGTTGGTGGTGCCAAAGACACCTGGAAGGCCTCCAATAGTTGGGATTTTGACAAGGCATGACTTCATGCCTGAGCATGTTTTAGGACTATATCCTCATTTGGACCCTCACAAGTAA 2367 0.452 MDGKVEERDLEIEGGMAMIMGNDDGKEGTDGISGPASDDVVKDRFLKEPLLLKNNRMNNTSQLAIVGANVSPIESLDYEIIENDLFKQDWRSRTKVEICQYVVLKWTLALLIGLITGLVGFFNNLAVENIAGFKLLFTNNLMLKEKYYQAFAALTGCNMILAIAAAAICAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSILGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYRLTWKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRSFMELCRGGKCGLFGEGGLIMFDVNEAKPSYSTPDLLVVIFLGVIGGIFGSLYNYLVDKVLRTYSIINERGPICKIVLVAVISFLTSCCSYGLPWLSQCIPCPSNLGDQCPTIGRSGHYRNYQCPPKHYNDLASLFFTTNDDAIRNLFTSGSDKEFQLSTLLIFFVAIYFLGIITYGIAVPSGLFIPVILAGASYGRLAGSLLSSFTLLDEGLFALLGAASFLGGTMRMTVSLCVILLELTNDLLMLPLVMLVLLISKTVADSFNSGVYDQIVKMKGLPYMEAHAEPYMRQLVASDVVSGPLVTFSGIENVGNIIHALRTTGHNGFPVIDEPPFSPASELCGLVLRSHLLVLLKKKNFTKQKMMTGSTIMRNFKARDFAKPGLGKGVKLEDLDILEEEMEMYVDLHPITNSSPYTVVESMSLAKAAVLFRQLGLRHLLVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHLDPHK 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3023 788 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 53 778 - -
Dere02g3023 788 SUPERFAMILY CBS-domain pair 599 773 IPR046342 -
Dere02g3023 788 Pfam CBS domain 724 772 IPR000644 -
Dere02g3023 788 PRINTS Plant CLC chloride channel signature 446 462 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dere02g3023 788 PRINTS Plant CLC chloride channel signature 290 298 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dere02g3023 788 PRINTS Plant CLC chloride channel signature 322 329 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dere02g3023 788 PRINTS Plant CLC chloride channel signature 79 87 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dere02g3023 788 PRINTS Plant CLC chloride channel signature 304 314 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dere02g3023 788 PRINTS Chloride channel signature 494 514 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere02g3023 788 PRINTS Chloride channel signature 205 224 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere02g3023 788 PRINTS Chloride channel signature 269 288 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere02g3023 788 PRINTS Chloride channel signature 526 542 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere02g3023 788 PRINTS Chloride channel signature 544 563 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere02g3023 788 PRINTS Chloride channel signature 174 191 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere02g3023 788 PRINTS Chloride channel signature 582 596 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere02g3023 788 Gene3D - 596 778 IPR046342 -
Dere02g3023 788 Gene3D Clc chloride channel 97 595 - -
Dere02g3023 788 CDD ClC_6_like 74 595 - -
Dere02g3023 788 SMART cbs_1 726 777 IPR000644 -
Dere02g3023 788 SMART cbs_1 615 668 IPR000644 -
Dere02g3023 788 ProSiteProfiles CBS domain profile. 722 786 IPR000644 -
Dere02g3023 788 CDD CBS_pair_voltage-gated_CLC_euk_bac 608 775 - -
Dere02g3023 788 SUPERFAMILY Clc chloride channel 83 597 IPR014743 -
Dere02g3023 788 Pfam Voltage gated chloride channel 162 576 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere02g3023 788 FunFam Chloride channel ClC3 97 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3023 Dere-ChrDere02 35915287 35921216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3023 1 788 Ion Channels AT5G49890 76.738 0.0 1180
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g3023 02 35915287 35921216 Dere02g3023 02 35915287 35921216 ECH