Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g3020 ATGGCTGTAGTTTCCCAATCTGTATCGCCCAAACCCGGTGAATGGGTGAAGGGAAAATTGATAGGATCAGGATCTTTTGGGACTGTTCATTTGGCCATGAGCAAATCCACAGGGGGACTCTTTGTTGTGAAATCGGCACACACACGGGCCGGATTTGGGGCTTTAGAGAATGAGGTCAAAATTCTCAAGACTCTAGAACCATCCCCTTATATAGTCCAATGCTTAGGGTCAGAAAAAGATGGAGGTAATCTCAATGTTCTAATGGAGTACATGGCTGGGGGCAGTTTGGCTGATGTGGCAGATAAATTTGGTGGATCATTACAAGAAGAGGTGGTTCGTTTGTACACTAAAGAAATCCTTCAAGGCCTGAAGTATCTTCACCATAATGGGATCGTGCATTGTGACCTCAAGTGCAAAAATGTGCTTCTGGGGTCTTCTGGGAACATCAAATTGGCAGATTTTGGATGCGCAAAGAGGGTGAAGGACTTGAAAAATGGAGGTCTAGTGAAGAATAGCAACTCTTTGGAGTATTTTTGTGGGACCCCACTATGGATGGCTCCTGAAGTTTTGAGGAATGAAAAGCTGGGTTTTGCTGCAGATATATGGTCTTTGGGATGTACTGTCATTGAAATGGCTACTGGTAGGCCTCCTTGGGGTGCTTCTGCTGATGTTTCAAACCCCATGGCTGCTCTTTTGAAGATTGCCTGTAGTGATGAGATACCTCAATTCCCAACCCATTTCTCTAGCGAGGGTTTGGATTTCTTGGGCAGATGCTTGGAAAGAGACTCAAGAAGGAGGTGGACTAGTGAGGAGCTGCTTAAGCATCCATTTGTGTCAAGGGATCCATCAACAACATCACCACCACCTTCTCAGAAAGCCTATGCTTGTTCTCCAGCTAGTGTATTGGGGGTTCCGAGTTTTAAGGATACTTATGATTTGGATGATGAACCAGAAAGTCCAGAGAATAATGATTTCTCCGTCAGAAACCCATTCACATGGTGCAAAGATGGAAGAATTGGAACGACAATGCCATGGCAGGGGGAAGACAGTGGATTTTGTTCATCAGAGAATTGGATTACTGTAAGATCAGGCTGA 1095 0.4484 MAVVSQSVSPKPGEWVKGKLIGSGSFGTVHLAMSKSTGGLFVVKSAHTRAGFGALENEVKILKTLEPSPYIVQCLGSEKDGGNLNVLMEYMAGGSLADVADKFGGSLQEEVVRLYTKEILQGLKYLHHNGIVHCDLKCKNVLLGSSGNIKLADFGCAKRVKDLKNGGLVKNSNSLEYFCGTPLWMAPEVLRNEKLGFAADIWSLGCTVIEMATGRPPWGASADVSNPMAALLKIACSDEIPQFPTHFSSEGLDFLGRCLERDSRRRWTSEELLKHPFVSRDPSTTSPPPSQKAYACSPASVLGVPSFKDTYDLDDEPESPENNDFSVRNPFTWCKDGRIGTTMPWQGEDSGFCSSENWITVRSG 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g3020 364 Gene3D Transferase(Phosphotransferase) domain 1 11 308 - -
Dere02g3020 364 ProSiteProfiles Protein kinase domain profile. 15 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3020 364 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 14 317 - -
Dere02g3020 364 SUPERFAMILY Protein kinase-like (PK-like) 13 316 IPR011009 -
Dere02g3020 364 MobiDBLite consensus disorder prediction 277 296 - -
Dere02g3020 364 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Dere02g3020 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Dere02g3020 364 Pfam Protein kinase domain 16 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3020 364 SMART serkin_6 15 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g3020 364 CDD STKc_MAPKKK 14 278 - -
Dere02g3020 364 MobiDBLite consensus disorder prediction 279 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g3020 Dere-ChrDere02 35851038 35852132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g3020 5 302 MAP Kinase Kinase Kinase AT5G55090 45.875 2.29e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere02g3020 Pkinase 3.5e-65 CL0016