Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2991 ATGGATAGGAACTTCAGTTCTTATAATCTTCTCTCGAATTCAAGCGATGGCAAACACAAGAATGATCACTCAGAGCAGCCTCATCATCATCATCATCTTGAAGAAGATCATATGTCTCCATCCTTAAATCTACAGAATGTTTCAAAGCTCATCCTTCCTCCACTTGGTGTTTCTAGCTATAACCAGAACCCAGTAGACTCCAAAGGTTGGATCATATCTCCAATGGATTCAAGATACAGGTGTTGGCAGAGTTGGATGGTGGTTCTGGTAGCATATTCAGCATGGGTTTATCCCTTTGAGATTGGTTTCCTCCATACCACACCAAATAGGGAATTGTACATAATAGACAATATTGTTAATATTTTTTTCGCTATTGATATTGTTCTCACATTTTTCGTGGCTTTTATCGATCGAAGAACTCAACTATTAGTTCGAGACTCAAAAAAAATTGCCACGAGGTACCTATCCACTTGGTTCGTGATGGATGTAGCATCAACTATTCCATATGAGGCATTGGGGTATTTGTTCACAGGCAAACACAAGGTGGGTCTTGTTTTCTACCTATTGGGCATGCTTAGATTTTGGCGGCTCAGAAGAGTGAAGCAATACTTCACGAGGCTTGAGAAAGACATCAGGTTCAGCTATTTCTGGGTTCGATGTACTAGGCTTCTCTCTGTAACACTATTTTCCGTCCATTGTGCTGGATGCCTGTACTACCTACTAGCCGATCGCTATCCTCACCAAGGAAAGACATGGATTGGGGCAGTGAACCCTAATTTCCGAGAGACGAGCCTATGGATCAGATACATCTCTGCCATGTACTGGTCGATCACGACCATGACCACCGTCGGTTATGGCGACCTTCACGCCGTCAACACCATCGAAATGATATTCATTATCTTCTACATGCTCTTCAACCTTGGCCTCACTGCTTACTTGATTGGTAACATGACAAATCTTGTTGTTGAAGGAACTCGCCGTACCATGGAGTTTCGAAACAGCATTGAAACTGCATCAAATTTTGTGTGCCGAAATCGTTTGCCTGCAAGGTTAAAAGAGCAGATCCTGGCCTATATGTGTTTGAGATTTAAGGCAGAGAGCTTGAATCAGCATCAGCTTATTGAACAGCTACCAAAGTCCATTTGCACAAGCATCTGCCAGCATTTGTTTTTACCAACTGTGGAGAAAGTCTATCTTTTCAAAGATGTCTCAAGAGAAATTCTCTTGTCATTGGTCGCTAAAATGAAGGCAGAGTATTTACCACCTAGAGAGGATGTTATCATGCAAAATGAAGCACCAGATGATGTTTACATTATAGTGTCAGGAGAAGTAGAGATCATTGATTGTGTAATGGAGAAAGAGAAAGTTTTAGGGACTTTACTAACAGGAGACATGTTTGGAGAAGTTGGTGCACTTTGTTGCAGACCTCAGAGCTTGACCTATAGAACCAAGACTCTCACACAGCTGTTGAGGCTCAAAACCAATGCTCTTATAGAATCAATGCAGACTAAAAAAGAAGACAACATACAAATACTTAAAAATTTTCTTCAGCATTTCAAGCAACTAAAGGATCTGAGTATTCGAGATTTAATGGTAGAGAGTGGAGAAGAAGAGGACCCAAACATGGCTGTGAACTTGCTAACTGTGGCTAGTACAGGCAATGCTGCTTTTCTTGAAGAGCTTCTCAAGGCAGGTTTGGATCCTGACATTGGAGACTCAAAAGGGAAAACCCCTTTGCACATAGCTGCATCAAATGGACGTGAAGAGTGTGTAAAAGTCTTGCTTAGACATGCATGCAACATACATATAAGAGACATCAACGGCAACACTGCCTTGTGGGATGCTATAGCATCAAAGCATCACTGCGTATTTAGGATCCTCTATCAACTTGCTTGCCTTTCTGATCCACAAACAGGAGGTGATCTCCTATGTACAGCAGCAAAAAGAAATGATTTAACAGTGATGAATGAGCTTTTGAAGCAAGGATTGAACATAGACTCCAAAGATCACCATGGTATGACAGCAGCTCAAGTAGCCATGGCAGAGAACCATGTAGAAATGGTTCAGCTTCTTGTCATGAACGGAGCAGATGTTTCGGGCATAGATACTCATAAGTTTTCTGCTTCTGCCTTGAATGAAATTCTGCAAAAGCGTGAGAGCGGTCATCAGATCACGGTACATGAGGCTACACCTGGTGAATTTGTATTAAGGGGACATGAAGTTGAGCAGGAGGAGCCGAGTTGGGGAAGATCTAGCAAACAAAACTTCCCAAGAGTGAGCATATATAGAGGTCACCCTTTAACGAGAAGACAAAATGGTTGCAAGGAGGCTGGGAAGCTCATAAGGATTCCTGATTCACTTGAGGAGCTCAAGAGAATTGCAGGTGAAAATTTTGGGTTTGAAGCAAAAGATGCAATGGTGACAAATGAGGAAGGAGCAGAGATAGACTCCATTGATGTGATAAGAGATAATGATAAACTTTTCATAGTTGACTAG 2496 0.4179 MDRNFSSYNLLSNSSDGKHKNDHSEQPHHHHHLEEDHMSPSLNLQNVSKLILPPLGVSSYNQNPVDSKGWIISPMDSRYRCWQSWMVVLVAYSAWVYPFEIGFLHTTPNRELYIIDNIVNIFFAIDIVLTFFVAFIDRRTQLLVRDSKKIATRYLSTWFVMDVASTIPYEALGYLFTGKHKVGLVFYLLGMLRFWRLRRVKQYFTRLEKDIRFSYFWVRCTRLLSVTLFSVHCAGCLYYLLADRYPHQGKTWIGAVNPNFRETSLWIRYISAMYWSITTMTTVGYGDLHAVNTIEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIETASNFVCRNRLPARLKEQILAYMCLRFKAESLNQHQLIEQLPKSICTSICQHLFLPTVEKVYLFKDVSREILLSLVAKMKAEYLPPREDVIMQNEAPDDVYIIVSGEVEIIDCVMEKEKVLGTLLTGDMFGEVGALCCRPQSLTYRTKTLTQLLRLKTNALIESMQTKKEDNIQILKNFLQHFKQLKDLSIRDLMVESGEEEDPNMAVNLLTVASTGNAAFLEELLKAGLDPDIGDSKGKTPLHIAASNGREECVKVLLRHACNIHIRDINGNTALWDAIASKHHCVFRILYQLACLSDPQTGGDLLCTAAKRNDLTVMNELLKQGLNIDSKDHHGMTAAQVAMAENHVEMVQLLVMNGADVSGIDTHKFSASALNEILQKRESGHQITVHEATPGEFVLRGHEVEQEEPSWGRSSKQNFPRVSIYRGHPLTRRQNGCKEAGKLIRIPDSLEELKRIAGENFGFEAKDAMVTNEEGAEIDSIDVIRDNDKLFIVD 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2991 831 FunFam Potassium channel KAT2 387 523 - -
Dere02g2991 831 ProSiteProfiles cAMP/cGMP binding motif profile. 399 518 IPR000595 -
Dere02g2991 831 Pfam KHA, dimerisation domain of potassium ion channel 757 829 IPR021789 -
Dere02g2991 831 MobiDBLite consensus disorder prediction 1 15 - -
Dere02g2991 831 SUPERFAMILY Voltage-gated potassium channels 74 322 - -
Dere02g2991 831 FunFam Potassium channel SKOR 80 322 - -
Dere02g2991 831 CDD CAP_ED 399 512 IPR000595 -
Dere02g2991 831 Gene3D - 82 322 - -
Dere02g2991 831 SMART ANK_2a 607 635 IPR002110 GO:0005515
Dere02g2991 831 SMART ANK_2a 638 667 IPR002110 GO:0005515
Dere02g2991 831 SMART ANK_2a 541 570 IPR002110 GO:0005515
Dere02g2991 831 SMART ANK_2a 574 603 IPR002110 GO:0005515
Dere02g2991 831 SMART ANK_2a 671 700 IPR002110 GO:0005515
Dere02g2991 831 Pfam Cyclic nucleotide-binding domain 419 502 IPR000595 -
Dere02g2991 831 Gene3D - 543 719 IPR036770 -
Dere02g2991 831 PRINTS Ankyrin repeat signature 687 701 IPR002110 GO:0005515
Dere02g2991 831 PRINTS Ankyrin repeat signature 575 590 IPR002110 GO:0005515
Dere02g2991 831 MobiDBLite consensus disorder prediction 16 35 - -
Dere02g2991 831 Pfam Ion transport protein 80 328 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere02g2991 831 ProSiteProfiles Ankyrin repeat profile. 638 670 IPR002110 GO:0005515
Dere02g2991 831 PANTHER POTASSIUM CHANNEL AKT1 44 830 IPR045319 GO:0005249|GO:0006813
Dere02g2991 831 SUPERFAMILY Ankyrin repeat 508 708 IPR036770 -
Dere02g2991 831 Gene3D Jelly Rolls 366 540 IPR014710 -
Dere02g2991 831 ProSiteProfiles Ankyrin repeat profile. 574 606 IPR002110 GO:0005515
Dere02g2991 831 ProSiteProfiles Ankyrin repeat profile. 671 703 IPR002110 GO:0005515
Dere02g2991 831 SMART cnmp_10 399 516 IPR000595 -
Dere02g2991 831 Pfam Ankyrin repeats (3 copies) 550 628 IPR002110 GO:0005515
Dere02g2991 831 SUPERFAMILY cAMP-binding domain-like 326 518 IPR018490 -
Dere02g2991 831 ProSiteProfiles Ankyrin repeat region circular profile. 671 702 - -
Dere02g2991 831 ProSiteProfiles KHA domain profile. 758 831 IPR021789 -
Dere02g2991 831 PRINTS EAG/ELK/ERG potassium channel family signature 269 286 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2991 831 PRINTS EAG/ELK/ERG potassium channel family signature 116 126 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2991 831 PRINTS EAG/ELK/ERG potassium channel family signature 295 306 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2991 831 PRINTS EAG/ELK/ERG potassium channel family signature 313 322 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2991 831 PRINTS EAG/ELK/ERG potassium channel family signature 127 136 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2991 831 ProSiteProfiles Ankyrin repeat region circular profile. 574 605 - -
Dere02g2991 831 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2991 Dere-ChrDere02 35338086 35346266 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2991 14 579 Ion Channels AT4G22200 74.386 0.0 869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2991 02 35338086 35346266 Dere02g2991 02 35338086 35346266 ECH