Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2990 ATGAGCCTATGGATCAGATACATCTCTGCCATGTGCTGGTCAATCACGACCATAACCATTGTTGGTTATGGCGAACTTCACGCCGTCAACACCATCAAAATGATATTCATTATCTTCTACATGCTCTTCAACCTTGGCCTCACTGCTTACTTGATTGGTAACATGACAAATCTTGTTGTTGAAGTTAAAAACGTTGATGTTGTTGTAGATGCAGAGAAATTGCATTGA 228 0.3991 MSLWIRYISAMCWSITTITIVGYGELHAVNTIKMIFIIFYMLFNLGLTAYLIGNMTNLVVEVKNVDVVVDAEKLH 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2990 75 Pfam Ion channel 6 60 IPR013099 -
Dere02g2990 75 SUPERFAMILY Voltage-gated potassium channels 3 63 - -
Dere02g2990 75 PRINTS EAG/ELK/ERG potassium channel family signature 51 60 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2990 75 PRINTS EAG/ELK/ERG potassium channel family signature 33 44 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2990 75 PRINTS EAG/ELK/ERG potassium channel family signature 7 24 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2990 75 PANTHER POTASSIUM CHANNEL AKT1 2 61 IPR045319 GO:0005249|GO:0006813
Dere02g2990 75 Gene3D - 2 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2990 Dere-ChrDere02 35333831 35334180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2990 2 60 Ion Channels AT2G26650 79.661 7.86e-29 105