Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2986 ATGAGTTTTCCAGTTGAAGTGGACAGTCAAGATGGCAAGCCCCAGAATGAGGGGCTTAAAGGTGGCCTTAAGGAACCAACTTTCTTGTATGGAGACTTGGATCTGTATATATTAGAAGCGAAAAATCTTCCAAATTTGGATATTTCTTCTGAAACAATTAGAAAATGTTTCACTATGGGCAACACTTGTACTCCTCCCTTCATGAAAGTGCGCAAGTTAAGCAATGGGAAATATCATGTGGATACTAGTGATCCCTATGTCTCTGTCGTTGTAGCCGGGGCTACTGTAGCTCAAACTCGAGTAGTTCGTAACTCTGAGAATCCTTCATGGGACGAGCATTTTCTTGTCCCCGTGGCTCACCCTGCTGAGAAAGTGGAGTTTATTGTGAAAGATGATGATGTTCTTGGGGCTGAAGTCATTGGAGCAGTAGAGATACCTATTCAAAGGATTTTGTCAGGAAATACTATTAATGATTGGTTTCCAATTGCTGGCGGGTACTCAGACAGCTCAAAAGGTAGTCCTGAGTTGCATATTTCTATTCAGTATAAGCCAGTTGGAGAAAACCCTTCAGAAAAAAGTGGCATTGGGGCTGGAGCAGATTATACTGGTATTCCTAACACATATTTCCCTCTTCGAAAAGGAGGGAAAGTGACTCTTTATCAAGATGCACATGTACTAGATGGTAAGCTACCTAAAATTCCACTTGAGGAGGGAAAAGTCTTTCAGCAGGATAAATGTTGGGAGGATATTTGCCATGCAATTTTGGAAGCTCAAGAGCTGATATACATTATAGGATGGTCCGTTTACCACCCTATAAAACTTGTCAGAGAACCAACAAAACCCTTACCTGCTGGTGGAGAGCTTCCGCTTGGAGAGTTGTTAAAATACAAGTCACAAGAAGGGGTCCGCGTGGTTATGCTGATCTGGGATGACAAAACTTCGCACGACAAATTATTTCTGAAAACAGAAGGTGTCATGCAGACCCATGATGAAGAAACTAAGAAATTTTTTAAACACTCCACTGTTCATTGTGTGCTTGCTCCACGTTATGCAAGCAATAAGCTCAGTATTTTTAAGCAACAGGTTGTGGGAACCCTTTTTACCCATCATCAAAAGTGTGTGCTTCTTGACACTCCTGCTTCTGAGAATAAACGGAAAATATGTGCTTTTATTGGTGGTCTAGATCTATGTGATGGCAGATATGATACTCCTGAGCATCGGCTCTTTGATGATTTAGATACTGTCTTTCAAAATGATATTCATAATCCTGTATTTCCTTCAAATCCTGGTGGACCAAGGGAACCATGGCATGACCTACATTGTAAAGTTGAAGGTCCAGCTGCATATGATATATTGACCAATTTTGAACAAAGATGGAGGAAAGCCAAAAAATGGCGTGAATTCAGGCTTAAAAAAGTGACAAGTTGGCACGATGATGCTTTGCTGAGGCTAGACCGTATTTCATGGATTCTAACGCCATCTTCTGGTGCTGCTGGTGATCAAGTTGTTCAAGTAACTGATGAAGATGATCCAGAGAGTTGGAATGTGCAGGTGTTTCGGTCCATAGATTCAGGATCGGTGCAGGGTTTTCCAAAGGATATTGACGAAGCTAAGGCTCAGCATCTTCTCTGTGGAAAGAACTTGAAAGTAGACAAAAGCATCCATACTGCTTATGTAAAAGCAATAAGATCAGCCCAACACTTCATATACATAGAGAATCAGTATTTTCTCGGATCCTCATATCATTGGCCATCATACGATAATGCAGGTGCTGACAACTTGGTTCCCATGGAGTTAGCTTTGAAAATTGCCGACAAGATCGATTCAAATCAACGTTTTTCTGTGTACGTTGTTATACCAATGTGGCCAGAGGGGCTTCCAACTAGTAATGCAGTGCAGGAAATCTTGTTCTGGCAGGGTCAGACAATGTCTATGATGTACGGCATTATTGCTGATGCCCTTAAAAAAAAAGGCCTCTCTAATCGGTATCATCCTCAAGATTATCTCAATTTTTATTGCCTTGGAAAGCGCGAACCTCAATCCTCTAAAAGTTCAACACTGATGCAAACAGCTGACCGTGCTTTGGCATCGGTTAACAAATATAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGACCAATTTATAATCATGGGATCTGCAAATATTAATCAGAGATCCTTGGACGGTTCAAGGGACACTGAAATTGCTATGGGTGCTTATCAGCCAAAACATACATGGGCAAGAAAGAAATCTCATCCTTATGGTCAGGTGTATGGTTACAGAATGTCTCTCTGGGCTGAGCACCTCAGTTCTCTTGAGGATGCTTTCAAGGAACCAGATAGCCTCGAATGTGTTAGACGTGTGAATGAAATTGCCAAGAGTAACTGGAGCGCATACGTATCTGAGGAAGACAAGGAGTTGAGGGGACACCTCATGCTGTATCCAGTTAAGGTTGGTAGGGATGGAAAAGTTAGCGCGCTGAAAGATTGGGAAAACTTCCCTGATTTTGGTGGTAAAGTTCTTGGAGCACCCAACTCTCTTCCTGATACACTAACCACTTAA 2577 0.4168 MSFPVEVDSQDGKPQNEGLKGGLKEPTFLYGDLDLYILEAKNLPNLDISSETIRKCFTMGNTCTPPFMKVRKLSNGKYHVDTSDPYVSVVVAGATVAQTRVVRNSENPSWDEHFLVPVAHPAEKVEFIVKDDDVLGAEVIGAVEIPIQRILSGNTINDWFPIAGGYSDSSKGSPELHISIQYKPVGENPSEKSGIGAGADYTGIPNTYFPLRKGGKVTLYQDAHVLDGKLPKIPLEEGKVFQQDKCWEDICHAILEAQELIYIIGWSVYHPIKLVREPTKPLPAGGELPLGELLKYKSQEGVRVVMLIWDDKTSHDKLFLKTEGVMQTHDEETKKFFKHSTVHCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVLLDTPASENKRKICAFIGGLDLCDGRYDTPEHRLFDDLDTVFQNDIHNPVFPSNPGGPREPWHDLHCKVEGPAAYDILTNFEQRWRKAKKWREFRLKKVTSWHDDALLRLDRISWILTPSSGAAGDQVVQVTDEDDPESWNVQVFRSIDSGSVQGFPKDIDEAKAQHLLCGKNLKVDKSIHTAYVKAIRSAQHFIYIENQYFLGSSYHWPSYDNAGADNLVPMELALKIADKIDSNQRFSVYVVIPMWPEGLPTSNAVQEILFWQGQTMSMMYGIIADALKKKGLSNRYHPQDYLNFYCLGKREPQSSKSSTLMQTADRALASVNKYRRFMIYVHAKGMIVDDQFIIMGSANINQRSLDGSRDTEIAMGAYQPKHTWARKKSHPYGQVYGYRMSLWAEHLSSLEDAFKEPDSLECVRRVNEIAKSNWSAYVSEEDKELRGHLMLYPVKVGRDGKVSALKDWENFPDFGGKVLGAPNSLPDTLTT 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2986 858 SUPERFAMILY Phospholipase D/nuclease 204 471 - -
Dere02g2986 858 PIRSF PLD_plant 20 858 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Dere02g2986 858 Pfam C2 domain 31 162 IPR000008 -
Dere02g2986 858 MobiDBLite consensus disorder prediction 1 20 - -
Dere02g2986 858 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 29 185 IPR035892 -
Dere02g2986 858 SUPERFAMILY Phospholipase D/nuclease 552 788 - -
Dere02g2986 858 Pfam PLD-like domain 559 740 IPR025202 -
Dere02g2986 858 Gene3D C2 domain 30 193 IPR035892 -
Dere02g2986 858 PANTHER PHOSPHOLIPASE D 28 847 IPR015679 -
Dere02g2986 858 FunFam Phospholipase D delta 237 480 - -
Dere02g2986 858 Gene3D Endonuclease Chain A 496 756 - -
Dere02g2986 858 Pfam Phospholipase D C terminal 778 848 IPR024632 -
Dere02g2986 858 ProSiteProfiles C2 domain profile. 14 160 IPR000008 -
Dere02g2986 858 Gene3D Endonuclease Chain A 236 481 - -
Dere02g2986 858 SMART C2_3c 32 159 IPR000008 -
Dere02g2986 858 SMART pld_4 704 731 IPR001736 GO:0003824
Dere02g2986 858 SMART pld_4 365 400 IPR001736 GO:0003824
Dere02g2986 858 CDD C2_plant_PLD 26 182 - -
Dere02g2986 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 704 731 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2986 Dere-ChrDere02 34660166 34672838 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2986 20 857 Phospholipase D Gene Family (Wang group) AT2G42010 53.172 0.0 924