Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2981 ATGATATCCAAAACTGCAGCTATTGGCCCTAAACAGATCCATGTTATTGGGTGTAAATTTGGTGGAAGCAAGAAGAAGGAAGAGGAGATGGAGAAATACGAGCTAGTGAAGGATATAGGATCTGGGAATTTTGGGGTGGCTAGGCTTATGCGAAACAAAGAGACCAAGGAGCTAGTTGCCATGAAATACATTGAACGAGGCCACAGGCAAATCTGCCATCGAGACTTGAAGCTGGAGAATACCTTGTTGGATGGAAGCCCTGCCCCACGTCTGAAAATTTGTGATTTTGGCTATTCTAAGTCATCTCTGCTTCACTCAAGACCAAAATCAACTGTGGGAACTCCTGCCTACATTGCACCAGAGGTTCTTTCACACAGAGAATATGATGGAAAGTTGGCTGATGTATGGTCCTGTGGAGTAACTCTTTATGTGATGCTGGTGGGAGCATACCCATTCGAGGACCAAGAAGACCCTAAAAACTTCAGGAAAACCATAAATCGGATTATGGCTGTTCAATACAAGATCCCAGACTATGTTCACATATCTCAGGACTGTAGGCATCTGCTGTCTCGCATTTTTGTGGCCAATCCAGCAAGGAGAATAACCATTAAAGAAATCAAGACCGATCCATGGTTTCTAAAGAACTTGCCTAGGGAATTGACAGAAATGGCCCAAGCTGTCTACTACAAGAAAGAGAACCCAACTTTTTCTCTTCAGAGTGTAGAAGACATAATGAAAATTGTTGAAGAGGCCAAAGTTCGACCATCAGCTTCTAGGTCCATTGGAGGGTCTGGCTGGAGAGGGGAGGAGGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAACTAGAACAAGAAGAAGAAAAAGAACAAGTACAAACAAATAAGGATGCAAATGGCAAGGAGGAAAAAGAAGAAGAAGAAGAGTATGAAAAGAGAGTCAAGGAGGCACAGGCTAGCGGCAAAGTTGACGTCAGCTAA 978 0.4315 MISKTAAIGPKQIHVIGCKFGGSKKKEEEMEKYELVKDIGSGNFGVARLMRNKETKELVAMKYIERGHRQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSHREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISQDCRHLLSRIFVANPARRITIKEIKTDPWFLKNLPRELTEMAQAVYYKKENPTFSLQSVEDIMKIVEEAKVRPSASRSIGGSGWRGEEEEEEKEEEEEELEQEEEKEQVQTNKDANGKEEKEEEEEYEKRVKEAQASGKVDVS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2981 325 MobiDBLite consensus disorder prediction 288 318 - -
Dere02g2981 325 SUPERFAMILY Protein kinase-like (PK-like) 26 245 IPR011009 -
Dere02g2981 325 ProSiteProfiles Protein kinase domain profile. 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2981 325 PANTHER SERINE/THREONINE KINASE 68 288 - -
Dere02g2981 325 Gene3D Phosphorylase Kinase; domain 1 17 71 - -
Dere02g2981 325 Pfam Protein kinase domain 69 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2981 325 MobiDBLite consensus disorder prediction 270 287 - -
Dere02g2981 325 SMART serkin_6 33 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2981 325 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Dere02g2981 325 Coils Coil 267 295 - -
Dere02g2981 325 MobiDBLite consensus disorder prediction 256 325 - -
Dere02g2981 325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 71 83 IPR008271 GO:0004672|GO:0006468
Dere02g2981 325 Gene3D Transferase(Phosphotransferase) domain 1 72 262 - -
Dere02g2981 325 Coils Coil 299 319 - -
Dere02g2981 325 FunFam Serine/threonine-protein kinase SRK2A 54 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2981 Dere-ChrDere02 34572457 34578954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2981 48 215 CBL-interacting serine-threonine protein kinases AT4G24400 40.884 2.42e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Dere02g2981 Pkinase 2.5e-36 CL0016