Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2979 ATGGCTTCCCATTCTTTACTGTTACCTGATCCCAACAATGCCATTCCAAAATTAAAGTTCGCTGTTCCATCTTTACTTTCTGCAAATTCTTCCTCTTTGAAGCGGAAAAGGCTTCCTGTTCCGTCATCGAAGGAGAATGTTTCTTGCAGTGGAATTGGGTTCGGGGTTTCTTCTGTAAAAGGCAAGAAATCGTGCATGGAAGATACTCACAAGATTGTTTCTTCATTAGAGAGCAACCCGAAGAAAACCAACATTCTCAAGATGATGGAGAATGGGGACGAGTCTAAGGCTAAGGAGGAGGCAATTAAAGCTGGCATTGGAGATTCTCATCTGAAGGACTGGGTGGTGGCTGAGCCTGATACTGAGATTTTACAATTGACTGTACACATTGAGTTTTTTGTTTTGGCTTCTGATGGACTGTGGGTAGAGGTTGGTAACCAAGAAGCTGTTGATACTGTGACACGTTCATGTCGAAAAGAAGAGATGCTTGGTTCCTCAGGAGATCTACATTTCTGGAAAGTTGGTAAAGTTTATTGGCTAGAAGCTGTTACAGATGTTCACATCCTTGACTTATCATGGACACTGCCTTGTCTACGTCAAGAGTATCTAAAGAAAACAAAAGATTATTTAGCTCATCTACTTGGGCATGAGGGTAGAGGAAGCTTGCATTCCTCTCTCAACGCTAGAGAATGGGCTACTTCTCTTGCTGGTGTTAGCGATGAAGGAATGCACACTCAGGCATAA 744 0.4261 MASHSLLLPDPNNAIPKLKFAVPSLLSANSSSLKRKRLPVPSSKENVSCSGIGFGVSSVKGKKSCMEDTHKIVSSLESNPKKTNILKMMENGDESKAKEEAIKAGIGDSHLKDWVVAEPDTEILQLTVHIEFFVLASDGLWVEVGNQEAVDTVTRSCRKEEMLGSSGDLHFWKVGKVYWLEAVTDVHILDLSWTLPCLRQEYLKKTKDYLAHLLGHEGRGSLHSSLNAREWATSLAGVSDEGMHTQA 247
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2979 247 SUPERFAMILY LuxS/MPP-like metallohydrolase 174 237 IPR011249 GO:0046872
Dere02g2979 247 SUPERFAMILY PP2C-like 105 155 IPR036457 -
Dere02g2979 247 Coils Coil 246 247 - -
Dere02g2979 247 PANTHER NARDILYSIN 170 242 - -
Dere02g2979 247 Gene3D - 171 246 - -
Dere02g2979 247 Gene3D - 99 170 IPR036457 -
Dere02g2979 247 Pfam Protein phosphatase 2C 106 160 IPR001932 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere02g2979 Dere-ChrDere02 34548167 34550179 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2979 79 157 PP2C-type Phosphatase Gene Family AT2G40180 45.455 1.63e-16 76.3