Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2972 ATGATGGAGAATTGTGACGAGTCTAAGGCCAAGGAGGAGGCAGTTAAAGCGGGAATCTCATTCTTCGTTGACGGTGGAAATGCTGATTTTATTGCACAATACTGGGTATTGGAAGCGGTGCCTGAGCGGAACTGGAGGATGAACGGAGATGAATTGGGGATAAGAAGCATTGGAGATTCTCATCTCAAGGACTGGGCGGTGGCTGAGCCTGAAACAAAGATTTTACAATTGACTGTAAACACGAAGTTTCTTATTTTGGCTTCTGATGGACTGTTGGTAGAGGTTGGTAACCAAGAAGCTGTATATACTGTGACACGTTTATGTCAAAAAGAAGAGATGCTGGGTTCGTCAGGAGATCTACATAAAAGCTATACCAATTCTGGGTTTCAAATTCAGACACTAGCAAAACCCATTGAAAAGGGCCTCAAATTTTGCTACAAGACCCGTCAGAAAACGAAGACCTGTGCGGTGAATGTGCATCGCTGTCTTCTCAACGCCGAGCTAAGTGAGTTAGCTGATACTGTTAAATATGAATGCAAAAGGATTGTCTTCCTTTTCTATGCTTTCCCATTTCTGATGCTTTGA 585 0.4308 MMENCDESKAKEEAVKAGISFFVDGGNADFIAQYWVLEAVPERNWRMNGDELGIRSIGDSHLKDWAVAEPETKILQLTVNTKFLILASDGLLVEVGNQEAVYTVTRLCQKEEMLGSSGDLHKSYTNSGFQIQTLAKPIEKGLKFCYKTRQKTKTCAVNVHRCLLNAELSELADTVKYECKRIVFLFYAFPFLML 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2972 194 SUPERFAMILY PP2C-like 43 109 IPR036457 -
Dere02g2972 194 Gene3D - 6 170 IPR036457 -
Dere02g2972 194 Pfam Protein phosphatase 2C 43 111 IPR001932 -
Dere02g2972 194 PANTHER PROTEIN PHOSPHATASE 2C 23 125 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2972 Dere-ChrDere02 34365200 34366888 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2972 45 104 PP2C-type Phosphatase Gene Family AT1G67820 61.667 1.92e-17 77.4