Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2967 ATGGGTTCAGACCTAAAGAATAGGCTCAAATTTATGTGTTGTGCTCATGACTGGTGTTACGCATGGCGTTTACTGGCAAATCTAGATGGATGCTCTCAGATGCTCATACGGGAGAATGGAATCCAACGTGTGTTTTTTGGAGTTCAATATCATTTTGGGCATGATTCTGAATTGCGTCAACAATTCTCCTCTGGGATAAAGACAATTGCAGTGATATTTGTCAAACCATGCGGGGTAGTACAAATTGGATCCACACAAAAGATCTTGGAAAGAGAGGATATTTTGGAACAAACACAAGGACTGCTCATGGGGACTAAAAATGTCGATGACCATGCATCATTAGATACAGTTCTCCCATGGGATATTGAAAATTATGATCAGAATGGGTTGTTGGCCTCTGAAAATTTATGTTCTTGGAATCTCAATTCAGATGATGATGAATACACCAAAGCGCTACTGAGAAATGCTTATTTTTCTGTTAGTGTGGATAAATCATTCCCTCCCACATACAAGAATCACGAAGAAGGAATGACTAGCTTCCGTGGGGAATCTTCTCGTACATCTTTGGCTTCTTCATCGAGGGCTCAAGATGTTACTGTTGAGGATTCAGCATCGAACGGAAGAGGGCTTGGACCAGGAGGGACATTTCAAGACAAATATGGGAATTTACTGAACCACCAGCCTTCTACCCAATCACTACTCAATCACATCAGGGAGAATACTTATGAAAATAGAAAACGAGAGGAGTCCACCAAGACTGTCAGGAAATATCGTCAGCAAATCCAAGACGGTATTAAAGAGTTGAGAGGGATCATCCCCAGTGGTGGAAAGTGTAGCATTGATTCCTTGTTGGATCGCTCCATCAAATACATGTTTTTCTTAGGAAGCATCACAAAATATGCAGACAAGCTGCAAGAACCCAAAAATCCCAAGCTCATTGAGGAGGCAAATGGTGTGGTTGTGAAGGACAAAAGTGTAGGAGAATCAGATAGTGAAATTGCAGGTCAAACAATGGTATACCCAATTATAGTTAAAGACATGAGCCCACCGGGCCAAATGCTCATAGAGATGCTTTGTGAGGAGCAGGGTTGGTTCCTTGAGATAGCAGAAGTGATTGGGGGGTTTGGATTAAATATATTGAGCGGAAAGATGGAAATCAGGGGCAACAAGTTATTGGGACGCTTTATTGTTGAGGCAAACAGACGTGTAACGAGGATAGATGTATTTAAGTACTTGGTACAGATTCTACGCTGCAACAAACAAATACCTCTGACGTGA 1278 0.4171 MGSDLKNRLKFMCCAHDWCYAWRLLANLDGCSQMLIRENGIQRVFFGVQYHFGHDSELRQQFSSGIKTIAVIFVKPCGVVQIGSTQKILEREDILEQTQGLLMGTKNVDDHASLDTVLPWDIENYDQNGLLASENLCSWNLNSDDDEYTKALLRNAYFSVSVDKSFPPTYKNHEEGMTSFRGESSRTSLASSSRAQDVTVEDSASNGRGLGPGGTFQDKYGNLLNHQPSTQSLLNHIRENTYENRKREESTKTVRKYRQQIQDGIKELRGIIPSGGKCSIDSLLDRSIKYMFFLGSITKYADKLQEPKNPKLIEEANGVVVKDKSVGESDSEIAGQTMVYPIIVKDMSPPGQMLIEMLCEEQGWFLEIAEVIGGFGLNILSGKMEIRGNKLLGRFIVEANRRVTRIDVFKYLVQILRCNKQIPLT 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2967 425 MobiDBLite consensus disorder prediction 181 203 - -
Dere02g2967 425 MobiDBLite consensus disorder prediction 220 238 - -
Dere02g2967 425 MobiDBLite consensus disorder prediction 239 255 - -
Dere02g2967 425 Gene3D - 236 309 IPR036638 GO:0046983
Dere02g2967 425 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 52 175 IPR043561 GO:0003700|GO:0006355
Dere02g2967 425 MobiDBLite consensus disorder prediction 168 255 - -
Dere02g2967 425 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 246 304 IPR036638 GO:0046983
Dere02g2967 425 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 245 294 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2967 Dere-ChrDere02 34247882 34250341 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2967 183 416 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 38.095 4.12e-43 158