Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2961 ATGGCCTCCTTCGAGTTCAGAAAACTCTTCGAAAAAAGACTGAGCTGCACAGATGTGATGTACAGATTGTCCATTCCCGCAAATGCACTGCAGTCTCTCCCACCCTTTGGAGAATCTCACTGCATCAAGCTCTCAGTCCATTACACTGTGAGGAACAAGCTGAAGCATCGTCATCTTCGTTGCACTGTGAGGAAGAAGAACAAGTATAGAAAGCCAGTGTTCGAAGGAGGGTGGAAGCAAGTTGTTCGAGACAAAGAGCTCAGAAAAGGTGACTACCTCTACTTCTATGGGATCTGTGATGGTACTTTCATGGTCGAAGTGGAGAGAAGCATAAGGATAATGGGTAAGAAGCTTGTCTCCAAACTTTAA 369 0.4526 MASFEFRKLFEKRLSCTDVMYRLSIPANALQSLPPFGESHCIKLSVHYTVRNKLKHRHLRCTVRKKNKYRKPVFEGGWKQVVRDKELRKGDYLYFYGICDGTFMVEVERSIRIMGKKLVSKL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2961 122 Pfam B3 DNA binding domain 22 109 IPR003340 GO:0003677
Dere02g2961 122 SUPERFAMILY DNA-binding pseudobarrel domain 9 107 IPR015300 -
Dere02g2961 122 Gene3D - 4 114 IPR015300 -
Dere02g2961 122 CDD B3_DNA 8 109 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2961 Dere-ChrDere02 34123179 34123547 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dere02g2961 B3 1.3e-07 CL0405